Hapmap 3.2.1 whole genome sequencing data

All data are in bam file format with alignment to maize B73 reference genome v3. The alignment was generated with "bwa mem". If you need fasta file, the SAMToFastq tool from the PICARD package can be used to convert bam to fastq files.
Citation: Construction of the third generation Zea mays haplotype map. Gigascience. 2017 Dec 30. doi: 10.1093/gigascience/gix134. [Epub ahead of print]

[Citation]

File Name	Description	Ref.	Chr	Format	Release Date	Size
bam	Reference genome: B73 v3; Alignment software: bwa mem
bai	BAM index file generated by samtools index.