Maize 282 association panel genotypes (7x, AGPv4 coordinates)

Genotypes of 282 association panel based on the whole genome sequencing data. This data set include the same markers as in HapMap V3.2.1, but called from higher coverage sequencing data than the HapMapV3.2.1 release. These files have their coordinates uplifted to agpv4 The VCF files can be downloaded from CyVerse in the directory: /iplant/home/shared/panzea/hapmap3/hmp321/unimputed/282_libs_2015/uplifted_APGv4. The file names are hmp321_agpv4_chr*.vcf.gz. You can use this icommand to download all files: iget -K -r /iplant/home/shared/panzea/hapmap3/hmp321/unimputed/282_libs_2015/uplifted_APGv4

[Citation] Bukowski et al. (2018) Gigascience. 2017 Dec 30. doi: 10.1093/gigascience/gix134. [Epub ahead of print]