c2pfam

AT2G36810.1 :

Domain Description Evalue Bits GA Start End
HEAT_2 HEAT repeats 0.0003 11 27.70 4 41
HEAT_EZ HEAT-like repeat 0.018 5 27.00 13 38
Cohesin_HEAT HEAT repeat associated with sister chromatid cohesion 0.0028 8 21.00 15 34
HEAT HEAT repeat 0.0012 9 23.50 17 43
Cnd1 non-SMC mitotic condensation complex subunit 1 0.17 2 26.40 17 47
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.23 2 22.10 216 243
HEAT_2 HEAT repeats 0.0011 9 27.70 227 283
HEAT HEAT repeat 0.11 3 23.50 237 253
UME UME (NUC010) domain 0.33 1 21.00 238 274
HEAT_EZ HEAT-like repeat 0.044 4 27.00 240 276
Tti2 Tti2 family 0.079 2 24.60 244 290
HEAT HEAT repeat 0.27 2 23.50 408 431
HEAT HEAT repeat 0.0096 6 23.50 1024 1046
Tti2 Tti2 family 0.78 -1 24.60 1065 1112
UME UME (NUC010) domain 0.98 -1 21.00 1067 1114
Adaptin_N Adaptin N terminal region 0.23 -1 20.30 1089 1184
Adaptin_N Adaptin N terminal region 2.1E-06 16 20.30 1374 1540
HEAT_2 HEAT repeats 0.00027 11 27.70 1380 1434
HEAT HEAT repeat 0.023 5 23.50 1383 1405
HEAT_EZ HEAT-like repeat 2E-05 15 27.00 1392 1440
Cnd1 non-SMC mitotic condensation complex subunit 1 1.7E-09 28 26.40 1409 1528
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.77 0 22.10 1410 1433
UME UME (NUC010) domain 0.00015 11 21.00 1413 1498
Cohesin_HEAT HEAT repeat associated with sister chromatid cohesion 0.15 2 21.00 1416 1436
Arm Armadillo/beta-catenin-like repeat 0.52 0 20.60 1418 1440
HEAT_2 HEAT repeats 2.4E-05 14 27.70 1419 1490
HEAT HEAT repeat 0.00071 10 23.50 1419 1443
RTP1_C1 Required for nuclear transport of RNA pol II C-terminus 1 0.00048 10 25.90 1425 1513
HEAT_EZ HEAT-like repeat 0.012 6 27.00 1432 1478
Vac14_Fab1_bd Vacuolar 14 Fab1-binding region 0.0026 8 22.10 1448 1513
Tti2 Tti2 family 0.00098 8 24.60 1450 1489
Arm Armadillo/beta-catenin-like repeat 0.012 6 20.60 1455 1478
HEAT HEAT repeat 0.028 5 23.50 1456 1479
UME UME (NUC010) domain 0.49 0 21.00 1496 1545
Arm Armadillo/beta-catenin-like repeat 0.28 1 20.60 1503 1521
HEAT_2 HEAT repeats 0.00052 10 27.70 1503 1565
HEAT HEAT repeat 0.014 6 23.50 1509 1526
HEAT_EZ HEAT-like repeat 0.0046 7 27.00 1512 1561
Cnd1 non-SMC mitotic condensation complex subunit 1 0.023 4 26.40 1536 1567
Arm Armadillo/beta-catenin-like repeat 0.11 2 20.60 1542 1561
HEAT HEAT repeat 0.001 9 23.50 1543 1570
Adaptin_N Adaptin N terminal region 0.18 0 20.30 1606 1680
HEAT_EZ HEAT-like repeat 0.0038 8 27.00 1650 1684
HEAT_2 HEAT repeats 0.39 1 27.70 1656 1679
HEAT HEAT repeat 0.011 6 23.50 1663 1686

1716

HEAT_2
HEAT_EZ
Cohesin_HEAT
HEAT
Cnd1
Vac14_Fab1_bd
HEAT_2
HEAT
UME
HEAT_EZ
Tti2
HEAT
HEAT
Tti2
UME
Adaptin_N
Adaptin_N
HEAT_2
HEAT
HEAT_EZ
Cnd1
Vac14_Fab1_bd
UME
Cohesin_HEAT
Arm
HEAT_2
HEAT
RTP1_C1
HEAT_EZ
Vac14_Fab1_bd
Tti2
Arm
HEAT
UME
Arm
HEAT_2
HEAT
HEAT_EZ
Cnd1
Arm
HEAT
Adaptin_N
HEAT_EZ
HEAT_2
HEAT

References:

HEAT_2

UME
15112237 Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire. Bioessays 2004;26:567-581.

RTP1_C1

Cohesin_HEAT

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

Tti2

Vac14_Fab1_bd

Adaptin_N
9261055 Linking cargo to vesicle formation: receptor tail interactions with coat proteins. Curr Opin Cell Biol 1997;9:488-495.
2495531 Structural and functional division into two domains of the large (100- to 115-kDa)chains of the clathrin-associated protein complex AP-2. Proc Natl Acad Sci U S A 1989;86:2612-2616.

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

HEAT_EZ

Cnd1

Domain	Description	Evalue	Bits	GA	Start	End
HEAT_2	HEAT repeats	0.0003	11	27.70	4	41
HEAT_EZ	HEAT-like repeat	0.018	5	27.00	13	38
Cohesin_HEAT	HEAT repeat associated with sister chromatid cohesion	0.0028	8	21.00	15	34
HEAT	HEAT repeat	0.0012	9	23.50	17	43
Cnd1	non-SMC mitotic condensation complex subunit 1	0.17	2	26.40	17	47
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.23	2	22.10	216	243
HEAT_2	HEAT repeats	0.0011	9	27.70	227	283
HEAT	HEAT repeat	0.11	3	23.50	237	253
UME	UME (NUC010) domain	0.33	1	21.00	238	274
HEAT_EZ	HEAT-like repeat	0.044	4	27.00	240	276
Tti2	Tti2 family	0.079	2	24.60	244	290
HEAT	HEAT repeat	0.27	2	23.50	408	431
HEAT	HEAT repeat	0.0096	6	23.50	1024	1046
Tti2	Tti2 family	0.78	-1	24.60	1065	1112
UME	UME (NUC010) domain	0.98	-1	21.00	1067	1114
Adaptin_N	Adaptin N terminal region	0.23	-1	20.30	1089	1184
Adaptin_N	Adaptin N terminal region	2.1E-06	16	20.30	1374	1540
HEAT_2	HEAT repeats	0.00027	11	27.70	1380	1434
HEAT	HEAT repeat	0.023	5	23.50	1383	1405
HEAT_EZ	HEAT-like repeat	2E-05	15	27.00	1392	1440
Cnd1	non-SMC mitotic condensation complex subunit 1	1.7E-09	28	26.40	1409	1528
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.77	0	22.10	1410	1433
UME	UME (NUC010) domain	0.00015	11	21.00	1413	1498
Cohesin_HEAT	HEAT repeat associated with sister chromatid cohesion	0.15	2	21.00	1416	1436
Arm	Armadillo/beta-catenin-like repeat	0.52	0	20.60	1418	1440
HEAT_2	HEAT repeats	2.4E-05	14	27.70	1419	1490
HEAT	HEAT repeat	0.00071	10	23.50	1419	1443
RTP1_C1	Required for nuclear transport of RNA pol II C-terminus 1	0.00048	10	25.90	1425	1513
HEAT_EZ	HEAT-like repeat	0.012	6	27.00	1432	1478
Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	0.0026	8	22.10	1448	1513
Tti2	Tti2 family	0.00098	8	24.60	1450	1489
Arm	Armadillo/beta-catenin-like repeat	0.012	6	20.60	1455	1478
HEAT	HEAT repeat	0.028	5	23.50	1456	1479
UME	UME (NUC010) domain	0.49	0	21.00	1496	1545
Arm	Armadillo/beta-catenin-like repeat	0.28	1	20.60	1503	1521
HEAT_2	HEAT repeats	0.00052	10	27.70	1503	1565
HEAT	HEAT repeat	0.014	6	23.50	1509	1526
HEAT_EZ	HEAT-like repeat	0.0046	7	27.00	1512	1561
Cnd1	non-SMC mitotic condensation complex subunit 1	0.023	4	26.40	1536	1567
Arm	Armadillo/beta-catenin-like repeat	0.11	2	20.60	1542	1561
HEAT	HEAT repeat	0.001	9	23.50	1543	1570
Adaptin_N	Adaptin N terminal region	0.18	0	20.30	1606	1680
HEAT_EZ	HEAT-like repeat	0.0038	8	27.00	1650	1684
HEAT_2	HEAT repeats	0.39	1	27.70	1656	1679
HEAT	HEAT repeat	0.011	6	23.50	1663	1686