c2pfam

AT2G36930.1 :

Domain Description Evalue Bits GA Start End
UPF0515 Uncharacterised protein UPF0515 0.0038 6 29.80 44 73
zf-U1 U1 zinc finger 8.9E-07 18 20.60 55 89
NOA36 NOA36 protein 0.00049 9 25.00 55 84
PHD_Oberon PHD - plant homeodomain finger protein 0.001 9 28.80 56 90
TUTase TUTase nucleotidyltransferase domain 1.8E-05 13 25.80 56 87
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 6.7E-13 38 22.60 57 83
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 1E-05 15 26.90 57 85
BIR Inhibitor of Apoptosis domain 0.0042 7 22.90 57 84
zf-C2H2_4 C2H2-type zinc finger 0.0016 9 27.00 58 79
zf-met Zinc-finger of C2H2 type 4.3E-06 17 21.20 58 82
Methyltransf_4 Putative methyltransferase 0.0094 5 20.10 74 86
TUTase TUTase nucleotidyltransferase domain 1.8E-05 13 25.80 131 168
UPF0515 Uncharacterised protein UPF0515 0.00092 8 29.80 131 154
NOA36 NOA36 protein 0.0021 7 25.00 135 164
PHD_Oberon PHD - plant homeodomain finger protein 0.021 4 28.80 136 170
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 1.1E-06 19 26.90 137 168
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 5.7E-11 32 22.60 137 163
BIR Inhibitor of Apoptosis domain 0.024 5 22.90 137 165
zf-C2H2_4 C2H2-type zinc finger 0.0013 9 27.00 138 159
zf-met Zinc-finger of C2H2 type 8.8E-06 16 21.20 138 162
zf-U1 U1 zinc finger 0.011 5 20.60 151 168
Methyltransf_4 Putative methyltransferase 0.013 5 20.10 154 168

198

UPF0515
zf-U1
NOA36
PHD_Oberon
TUTase
zf-C2H2_jaz
zf-C2H2_2
BIR
zf-C2H2_4
zf-met
Methyltransf_4
TUTase
UPF0515
NOA36
PHD_Oberon
zf-C2H2_2
zf-C2H2_jaz
BIR
zf-C2H2_4
zf-met
zf-U1
Methyltransf_4

References:

UPF0515

BIR
8139034 An apoptosis-inhibiting gene from a nuclear polyhedrosis virus encoding a polypeptide with Cys/His sequence motifs. J Virol 1994;68:2521-2528.
11516343 Inhibitor of apoptosis proteins and their relatives: IAPs and other BIRPs. Genome Biol 2001;2:REVIEWS3009.

NOA36

zf-C2H2_2

zf-U1
12486009 The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5' splice sites. EMBO J 2002;21:6882-6892.

zf-C2H2_4

TUTase

zf-met

Methyltransf_4

PHD_Oberon

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
UPF0515	Uncharacterised protein UPF0515	0.0038	6	29.80	44	73
zf-U1	U1 zinc finger	8.9E-07	18	20.60	55	89
NOA36	NOA36 protein	0.00049	9	25.00	55	84
PHD_Oberon	PHD - plant homeodomain finger protein	0.001	9	28.80	56	90
TUTase	TUTase nucleotidyltransferase domain	1.8E-05	13	25.80	56	87
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	6.7E-13	38	22.60	57	83
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	1E-05	15	26.90	57	85
BIR	Inhibitor of Apoptosis domain	0.0042	7	22.90	57	84
zf-C2H2_4	C2H2-type zinc finger	0.0016	9	27.00	58	79
zf-met	Zinc-finger of C2H2 type	4.3E-06	17	21.20	58	82
Methyltransf_4	Putative methyltransferase	0.0094	5	20.10	74	86
TUTase	TUTase nucleotidyltransferase domain	1.8E-05	13	25.80	131	168
UPF0515	Uncharacterised protein UPF0515	0.00092	8	29.80	131	154
NOA36	NOA36 protein	0.0021	7	25.00	135	164
PHD_Oberon	PHD - plant homeodomain finger protein	0.021	4	28.80	136	170
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	1.1E-06	19	26.90	137	168
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	5.7E-11	32	22.60	137	163
BIR	Inhibitor of Apoptosis domain	0.024	5	22.90	137	165
zf-C2H2_4	C2H2-type zinc finger	0.0013	9	27.00	138	159
zf-met	Zinc-finger of C2H2 type	8.8E-06	16	21.20	138	162
zf-U1	U1 zinc finger	0.011	5	20.60	151	168
Methyltransf_4	Putative methyltransferase	0.013	5	20.10	154	168