c2pfam

AT2G37660.1 :

Domain Description Evalue Bits GA Start End
DapB_N Dihydrodipicolinate reductase, N-terminus 2E-05 14 20.80 78 117
NmrA NmrA-like family 2.3E-11 33 20.60 79 247
Epimerase NAD dependent epimerase/dehydratase family 9.4E-07 17 20.60 79 150
Polysacc_synt_2 Polysaccharide biosynthesis protein 0.00051 8 20.20 79 148
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 4.7E-08 21 20.00 80 208
NAD_binding_10 NAD(P)H-binding 4.7E-38 120 27.20 83 289
Peripla_BP_4 Periplasmic binding protein domain 0.46 -1 35.10 84 127
Peripla_BP_4 Periplasmic binding protein domain 1.1E-05 14 35.10 176 225
Polysacc_synt_2 Polysaccharide biosynthesis protein 0.01 4 20.20 183 205

325

DapB_N
NmrA
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_10
Peripla_BP_4
Peripla_BP_4
Polysacc_synt_2

References:

Peripla_BP_4

DapB_N
8873595 Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: thermodynamic and structural analysis of binary complexes. Biochemistry 1996;35:13294-13302.
9398235 Three-dimensional structure of Escherichia coli dihydrodipicolinate reductase in complex with NADH and the inhibitor 2,6-pyridinedicarboxylate. Biochemistry 1997;36:15081-15088.
7893645 Three-dimensional structure of Escherichia coli dihydrodipicolinate reductase. Biochemistry 1995;34:3502-3512.

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

3Beta_HSD
1562516 Structure and tissue-specific expression of 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase genes in human and rat classical and peripheral steroidogenic tissues. J Steroid Biochem Mol Biol 1992;41:421-435.

NmrA
11726498 The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/reductases. EMBO J 2001;20:6619-6626.

NAD_binding_10

Domain	Description	Evalue	Bits	GA	Start	End
DapB_N	Dihydrodipicolinate reductase, N-terminus	2E-05	14	20.80	78	117
NmrA	NmrA-like family	2.3E-11	33	20.60	79	247
Epimerase	NAD dependent epimerase/dehydratase family	9.4E-07	17	20.60	79	150
Polysacc_synt_2	Polysaccharide biosynthesis protein	0.00051	8	20.20	79	148
3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	4.7E-08	21	20.00	80	208
NAD_binding_10	NAD(P)H-binding	4.7E-38	120	27.20	83	289
Peripla_BP_4	Periplasmic binding protein domain	0.46	-1	35.10	84	127
Peripla_BP_4	Periplasmic binding protein domain	1.1E-05	14	35.10	176	225
Polysacc_synt_2	Polysaccharide biosynthesis protein	0.01	4	20.20	183	205