c2pfam

AT2G37670.1 :

Domain Description Evalue Bits GA Start End
WD40 WD domain, G-beta repeat 2.1E-08 24 21.00 400 431
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.01 5 22.90 401 439
WD40_like WD40-like domain 0.063 1 40.00 407 442
ArfA Alternative ribosome-rescue factor A 9.3E-05 11 25.50 464 480
WD40 WD domain, G-beta repeat 6.8E-10 28 21.00 497 533
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 8.4E-05 12 22.90 506 555
Nup160 Nucleoporin Nup120/160 9.9E-05 10 19.20 511 541
WD40_like WD40-like domain 6.7E-07 18 40.00 515 618
WD40 WD domain, G-beta repeat 1.3E-06 18 21.00 539 575
Nup160 Nucleoporin Nup120/160 0.0017 6 19.20 551 588
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.026 3 27.00 552 591
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00076 9 22.90 572 629
WD40 WD domain, G-beta repeat 0.1 3 21.00 589 616
WD40_like WD40-like domain 0.011 4 40.00 628 677
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.17 1 22.90 634 676
WD40 WD domain, G-beta repeat 0.083 3 21.00 642 666
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.0022 7 27.00 647 678
WD40 WD domain, G-beta repeat 3E-05 14 21.00 673 710
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.045 3 22.90 689 727
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.11 1 27.00 692 714

903

WD40
ANAPC4_WD40
WD40_like
ArfA
WD40
ANAPC4_WD40
Nup160
WD40_like
WD40
Nup160
BBS2_Mid
ANAPC4_WD40
WD40
WD40_like
ANAPC4_WD40
WD40
BBS2_Mid
WD40
ANAPC4_WD40
BBS2_Mid

References:

BBS2_Mid

ANAPC4_WD40

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40_like

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

ArfA

Domain	Description	Evalue	Bits	GA	Start	End
WD40	WD domain, G-beta repeat	2.1E-08	24	21.00	400	431
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.01	5	22.90	401	439
WD40_like	WD40-like domain	0.063	1	40.00	407	442
ArfA	Alternative ribosome-rescue factor A	9.3E-05	11	25.50	464	480
WD40	WD domain, G-beta repeat	6.8E-10	28	21.00	497	533
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	8.4E-05	12	22.90	506	555
Nup160	Nucleoporin Nup120/160	9.9E-05	10	19.20	511	541
WD40_like	WD40-like domain	6.7E-07	18	40.00	515	618
WD40	WD domain, G-beta repeat	1.3E-06	18	21.00	539	575
Nup160	Nucleoporin Nup120/160	0.0017	6	19.20	551	588
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.026	3	27.00	552	591
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00076	9	22.90	572	629
WD40	WD domain, G-beta repeat	0.1	3	21.00	589	616
WD40_like	WD40-like domain	0.011	4	40.00	628	677
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.17	1	22.90	634	676
WD40	WD domain, G-beta repeat	0.083	3	21.00	642	666
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.0022	7	27.00	647	678
WD40	WD domain, G-beta repeat	3E-05	14	21.00	673	710
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.045	3	22.90	689	727
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.11	1	27.00	692	714