c2pfam

AT1G11340.1 :

Domain Description Evalue Bits GA Start End
B_lectin D-mannose binding lectin 3.8E-36 114 26.30 67 173
S_locus_glycop S-locus glycoprotein family 2.2E-38 121 21.20 205 316
EGF_3 EGF domain 0.00043 10 28.50 286 313
hEGF Human growth factor-like EGF 0.00018 12 29.30 290 312
PAN_2 PAN-like domain 2.3E-26 82 21.10 338 405
Orf78 Orf78 (ac78) 0.00011 12 28.00 423 471
TMEM154 TMEM154 protein family 2.3E-05 14 30.30 438 518
EphA2_TM Ephrin type-A receptor 2 transmembrane domain 0.00021 12 28.90 443 485
Pkinase Protein kinase domain 0 152 20.40 516 736
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 170 23.10 517 782
APH Phosphotransferase enzyme family 1.8E-05 14 22.40 606 663
DUF3403 Domain of unknown function (DUF3403) 2.3E-09 27 27.30 789 833

833

B_lectin
S_locus_glycop
EGF_3
hEGF
PAN_2
Orf78
TMEM154
EphA2_TM
Pkinase
PK_Tyr_Ser-Thr
APH
DUF3403

References:

TMEM154

S_locus_glycop
7672580 Evolutionary aspects of the S-related genes of the Brassica self-incompatibility system: synonymous and nonsynonymous base substitutions. Genetics 1995;140:1099-1104.
9648745 Polymorphism of the S-locus glycoprotein gene (SLG) and the S-locus related gene (SLR1) in Raphanus sativus L. and self-incompatible ornamental plants in the Brassicaceae. Mol Gen Genet 1998;258:397-403.

PAN_2

DUF3403

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

hEGF

B_lectin
8939757 The 2.0 A structure of a cross-linked complex between snowdrop lectin and a branched mannopentaose: evidence for two unique binding modes. Structure 1996;4:1339-1352.
12533465 Plant lectin-like bacteriocin from a rhizosphere-colonizing Pseudomonas isolate. J Bacteriol 2003;185:897-908.

EGF_3

EphA2_TM

Orf78

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
B_lectin	D-mannose binding lectin	3.8E-36	114	26.30	67	173
S_locus_glycop	S-locus glycoprotein family	2.2E-38	121	21.20	205	316
EGF_3	EGF domain	0.00043	10	28.50	286	313
hEGF	Human growth factor-like EGF	0.00018	12	29.30	290	312
PAN_2	PAN-like domain	2.3E-26	82	21.10	338	405
Orf78	Orf78 (ac78)	0.00011	12	28.00	423	471
TMEM154	TMEM154 protein family	2.3E-05	14	30.30	438	518
EphA2_TM	Ephrin type-A receptor 2 transmembrane domain	0.00021	12	28.90	443	485
Pkinase	Protein kinase domain	0	152	20.40	516	736
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	170	23.10	517	782
APH	Phosphotransferase enzyme family	1.8E-05	14	22.40	606	663
DUF3403	Domain of unknown function (DUF3403)	2.3E-09	27	27.30	789	833