c2pfam

AT2G41100.1 :

Domain Description Evalue Bits GA Start End
DUF5663 Protein of unknown function (DUF5663) 0.063 4 23.70 1 15
DUF3349 Protein of unknown function (DUF3349) 0.01 7 25.00 3 52
EF-hand_4 Cytoskeletal-regulatory complex EF hand 4.4E-07 21 21.30 3 73
SAP18 Sin3 associated polypeptide p18 (SAP18) 0.17 3 20.80 7 80
EF-hand_1 EF hand 4.6E-11 32 25.40 12 39
EF-hand_6 EF-hand domain 5.1E-10 29 25.00 13 41
EF-hand_7 EF-hand domain pair 2.8E-18 57 30.00 13 73
EF-hand_8 EF-hand domain pair 0.00031 11 28.00 14 36
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.006 8 26.90 14 65
EF-hand_5 EF hand 9.1E-10 28 25.90 16 37
EF-hand_9 EF-hand domain 5.4E-10 30 37.00 16 74
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00014 13 21.40 16 70
Caleosin Caleosin related protein 0.034 5 20.60 17 41
Dockerin_1 Dockerin type I repeat 0.00018 12 20.50 20 72
DUF1707 Domain of unknown function (DUF1707) 0.5 1 26.10 23 53
T3SS_HrpK1 Type III secretion system translocator protein, HrpF 0.014 6 30.90 23 54
DUF5035 Domain of unknown function (DUF5035) 0.64 0 25.00 24 66
EF-hand_8 EF-hand domain pair 1.2E-12 38 28.00 25 75
UPF0154 Uncharacterised protein family (UPF0154) 5.4E-05 14 20.90 28 55
DUF1811 Protein of unknown function (DUF1811) 0.091 4 20.60 28 57
Lys C-type lysozyme/alpha-lactalbumin family 0.0071 7 20.90 45 82
EF-hand_1 EF hand 6.3E-10 29 25.40 48 75
EF-hand_5 EF hand 7.6E-08 22 25.90 49 69
EF-hand_6 EF-hand domain 2E-05 15 25.00 49 74
CARDB CARDB 0.19 3 21.90 75 132
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 1.1E-05 16 21.40 81 159
DUF5663 Protein of unknown function (DUF5663) 0.0057 8 23.70 88 104
DUF3349 Protein of unknown function (DUF3349) 0.33 2 25.00 91 132
EF-hand_4 Cytoskeletal-regulatory complex EF hand 3.2E-06 18 21.30 92 162
EF-hand_1 EF hand 1.5E-10 31 25.40 101 128
EF-hand_6 EF-hand domain 5.3E-10 29 25.00 102 130
EF-hand_8 EF-hand domain pair 3.2E-05 14 28.00 102 128
EF-hand_7 EF-hand domain pair 1.7E-17 54 30.00 102 162
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.0053 8 26.90 103 154
EF-hand_9 EF-hand domain 1.2E-05 16 37.00 105 163
EF-hand_5 EF hand 2.7E-10 30 25.90 105 126
Caleosin Caleosin related protein 0.02 5 20.60 106 134
Dockerin_1 Dockerin type I repeat 0.032 5 20.50 107 125
Dockerin_1 Dockerin type I repeat 0.0024 9 20.50 109 155
DUF5035 Domain of unknown function (DUF5035) 0.0031 8 25.00 112 164
DUF1707 Domain of unknown function (DUF1707) 0.46 1 26.10 112 141
T3SS_HrpK1 Type III secretion system translocator protein, HrpF 0.02 5 30.90 112 142
EF-hand_8 EF-hand domain pair 2.8E-13 40 28.00 114 164
DUF1811 Protein of unknown function (DUF1811) 0.0073 7 20.60 117 146
UPF0154 Uncharacterised protein family (UPF0154) 0.00085 10 20.90 117 145
Lys C-type lysozyme/alpha-lactalbumin family 0.075 4 20.90 133 184
EF-hand_1 EF hand 7.6E-11 32 25.40 137 164
EF-hand_5 EF hand 5.3E-08 23 25.90 138 158
EF-hand_6 EF-hand domain 4.6E-05 14 25.00 138 163
CARDB CARDB 0.027 5 21.90 164 190
DUF5663 Protein of unknown function (DUF5663) 0.23 3 23.70 178 195
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 2.1E-05 15 21.40 186 249
EF-hand_4 Cytoskeletal-regulatory complex EF hand 3.7E-05 14 21.30 188 253
EF-hand_6 EF-hand domain 1.5E-11 34 25.00 191 220
EF-hand_8 EF-hand domain pair 1.9E-05 15 28.00 191 211
EF-hand_1 EF hand 1.9E-12 37 25.40 191 219
EF-hand_7 EF-hand domain pair 1.5E-18 58 30.00 192 252
EF-hand_5 EF hand 9.6E-10 28 25.90 193 214
EF-hand_9 EF-hand domain 2.8E-09 28 37.00 195 253
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.31 2 26.90 196 241
Caleosin Caleosin related protein 0.0043 8 20.60 198 221
Dockerin_1 Dockerin type I repeat 0.0005 11 20.50 199 247
T3SS_HrpK1 Type III secretion system translocator protein, HrpF 0.59 0 30.90 202 239
DUF1707 Domain of unknown function (DUF1707) 0.0097 7 26.10 203 231
DUF5035 Domain of unknown function (DUF5035) 0.1 3 25.00 203 245
EF-hand_8 EF-hand domain pair 2.7E-13 40 28.00 205 250
DUF5132 Protein of unknown function (DUF5132) 0.0016 9 25.00 207 237
UPF0154 Uncharacterised protein family (UPF0154) 0.14 3 20.90 207 234
DUF1811 Protein of unknown function (DUF1811) 0.0051 8 20.60 208 236
Lys C-type lysozyme/alpha-lactalbumin family 0.0057 8 20.90 223 263
Caleosin Caleosin related protein 0.97 0 20.60 226 248
EF-hand_1 EF hand 3.7E-11 33 25.40 227 253
EF-hand_5 EF hand 2.9E-08 24 25.90 228 248
EF-hand_6 EF-hand domain 1.8E-05 15 25.00 228 253
CARDB CARDB 0.51 1 21.90 260 289

324

DUF5663
DUF3349
EF-hand_4
SAP18
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
VCBS
EF-hand_5
EF-hand_9
SPARC_Ca_bdg
Caleosin
Dockerin_1
DUF1707
T3SS_HrpK1
DUF5035
EF-hand_8
UPF0154
DUF1811
Lys
EF-hand_1
EF-hand_5
EF-hand_6
CARDB
SPARC_Ca_bdg
DUF5663
DUF3349
EF-hand_4
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
VCBS
EF-hand_9
EF-hand_5
Caleosin
Dockerin_1
Dockerin_1
DUF5035
DUF1707
T3SS_HrpK1
EF-hand_8
DUF1811
UPF0154
Lys
EF-hand_1
EF-hand_5
EF-hand_6
CARDB
DUF5663
SPARC_Ca_bdg
EF-hand_4
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_9
VCBS
Caleosin
Dockerin_1
T3SS_HrpK1
DUF1707
DUF5035
EF-hand_8
DUF5132
UPF0154
DUF1811
Lys
Caleosin
EF-hand_1
EF-hand_5
EF-hand_6
CARDB

References:

DUF1707

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

DUF3349

DUF5035

Lys

DUF5663

EF-hand_1

EF-hand_8

CARDB

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

DUF5132

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

T3SS_HrpK1

UPF0154

VCBS

DUF1811

SAP18
9150135 Histone deacetylases and SAP18, a novel polypeptide, are components of a human Sin3 complex. Cell 1997;89:357-364.
12665594 ASAP, a novel protein complex involved in RNA processing and apoptosis. Mol Cell Biol 2003;23:2981-2990.

Domain	Description	Evalue	Bits	GA	Start	End
DUF5663	Protein of unknown function (DUF5663)	0.063	4	23.70	1	15
DUF3349	Protein of unknown function (DUF3349)	0.01	7	25.00	3	52
EF-hand_4	Cytoskeletal-regulatory complex EF hand	4.4E-07	21	21.30	3	73
SAP18	Sin3 associated polypeptide p18 (SAP18)	0.17	3	20.80	7	80
EF-hand_1	EF hand	4.6E-11	32	25.40	12	39
EF-hand_6	EF-hand domain	5.1E-10	29	25.00	13	41
EF-hand_7	EF-hand domain pair	2.8E-18	57	30.00	13	73
EF-hand_8	EF-hand domain pair	0.00031	11	28.00	14	36
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.006	8	26.90	14	65
EF-hand_5	EF hand	9.1E-10	28	25.90	16	37
EF-hand_9	EF-hand domain	5.4E-10	30	37.00	16	74
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00014	13	21.40	16	70
Caleosin	Caleosin related protein	0.034	5	20.60	17	41
Dockerin_1	Dockerin type I repeat	0.00018	12	20.50	20	72
DUF1707	Domain of unknown function (DUF1707)	0.5	1	26.10	23	53
T3SS_HrpK1	Type III secretion system translocator protein, HrpF	0.014	6	30.90	23	54
DUF5035	Domain of unknown function (DUF5035)	0.64	0	25.00	24	66
EF-hand_8	EF-hand domain pair	1.2E-12	38	28.00	25	75
UPF0154	Uncharacterised protein family (UPF0154)	5.4E-05	14	20.90	28	55
DUF1811	Protein of unknown function (DUF1811)	0.091	4	20.60	28	57
Lys	C-type lysozyme/alpha-lactalbumin family	0.0071	7	20.90	45	82
EF-hand_1	EF hand	6.3E-10	29	25.40	48	75
EF-hand_5	EF hand	7.6E-08	22	25.90	49	69
EF-hand_6	EF-hand domain	2E-05	15	25.00	49	74
CARDB	CARDB	0.19	3	21.90	75	132
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	1.1E-05	16	21.40	81	159
DUF5663	Protein of unknown function (DUF5663)	0.0057	8	23.70	88	104
DUF3349	Protein of unknown function (DUF3349)	0.33	2	25.00	91	132
EF-hand_4	Cytoskeletal-regulatory complex EF hand	3.2E-06	18	21.30	92	162
EF-hand_1	EF hand	1.5E-10	31	25.40	101	128
EF-hand_6	EF-hand domain	5.3E-10	29	25.00	102	130
EF-hand_8	EF-hand domain pair	3.2E-05	14	28.00	102	128
EF-hand_7	EF-hand domain pair	1.7E-17	54	30.00	102	162
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.0053	8	26.90	103	154
EF-hand_9	EF-hand domain	1.2E-05	16	37.00	105	163
EF-hand_5	EF hand	2.7E-10	30	25.90	105	126
Caleosin	Caleosin related protein	0.02	5	20.60	106	134
Dockerin_1	Dockerin type I repeat	0.032	5	20.50	107	125
Dockerin_1	Dockerin type I repeat	0.0024	9	20.50	109	155
DUF5035	Domain of unknown function (DUF5035)	0.0031	8	25.00	112	164
DUF1707	Domain of unknown function (DUF1707)	0.46	1	26.10	112	141
T3SS_HrpK1	Type III secretion system translocator protein, HrpF	0.02	5	30.90	112	142
EF-hand_8	EF-hand domain pair	2.8E-13	40	28.00	114	164
DUF1811	Protein of unknown function (DUF1811)	0.0073	7	20.60	117	146
UPF0154	Uncharacterised protein family (UPF0154)	0.00085	10	20.90	117	145
Lys	C-type lysozyme/alpha-lactalbumin family	0.075	4	20.90	133	184
EF-hand_1	EF hand	7.6E-11	32	25.40	137	164
EF-hand_5	EF hand	5.3E-08	23	25.90	138	158
EF-hand_6	EF-hand domain	4.6E-05	14	25.00	138	163
CARDB	CARDB	0.027	5	21.90	164	190
DUF5663	Protein of unknown function (DUF5663)	0.23	3	23.70	178	195
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	2.1E-05	15	21.40	186	249
EF-hand_4	Cytoskeletal-regulatory complex EF hand	3.7E-05	14	21.30	188	253
EF-hand_6	EF-hand domain	1.5E-11	34	25.00	191	220
EF-hand_8	EF-hand domain pair	1.9E-05	15	28.00	191	211
EF-hand_1	EF hand	1.9E-12	37	25.40	191	219
EF-hand_7	EF-hand domain pair	1.5E-18	58	30.00	192	252
EF-hand_5	EF hand	9.6E-10	28	25.90	193	214
EF-hand_9	EF-hand domain	2.8E-09	28	37.00	195	253
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.31	2	26.90	196	241
Caleosin	Caleosin related protein	0.0043	8	20.60	198	221
Dockerin_1	Dockerin type I repeat	0.0005	11	20.50	199	247
T3SS_HrpK1	Type III secretion system translocator protein, HrpF	0.59	0	30.90	202	239
DUF1707	Domain of unknown function (DUF1707)	0.0097	7	26.10	203	231
DUF5035	Domain of unknown function (DUF5035)	0.1	3	25.00	203	245
EF-hand_8	EF-hand domain pair	2.7E-13	40	28.00	205	250
DUF5132	Protein of unknown function (DUF5132)	0.0016	9	25.00	207	237
UPF0154	Uncharacterised protein family (UPF0154)	0.14	3	20.90	207	234
DUF1811	Protein of unknown function (DUF1811)	0.0051	8	20.60	208	236
Lys	C-type lysozyme/alpha-lactalbumin family	0.0057	8	20.90	223	263
Caleosin	Caleosin related protein	0.97	0	20.60	226	248
EF-hand_1	EF hand	3.7E-11	33	25.40	227	253
EF-hand_5	EF hand	2.9E-08	24	25.90	228	248
EF-hand_6	EF-hand domain	1.8E-05	15	25.00	228	253
CARDB	CARDB	0.51	1	21.90	260	289