c2pfam

AT2G41410.1 :

Domain Description Evalue Bits GA Start End
SR-25 Nuclear RNA-splicing-associated protein 0.0056 6 55.00 17 44
Secretin_N_2 Secretin N-terminal domain 2.5E-05 15 22.00 19 78
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.56 0 21.30 62 86
EF-hand_7 EF-hand domain pair 3.2E-11 33 30.00 70 129
EF-hand_1 EF hand 2E-06 17 25.40 70 97
EF-hand_6 EF-hand domain 8.1E-08 22 25.00 71 96
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.047 4 21.40 71 99
EF-hand_5 EF hand 6.6E-06 15 25.90 72 94
EF-hand_9 EF-hand domain 0.0094 6 37.00 74 127
EF-hand_8 EF-hand domain pair 0.0011 9 28.00 75 88
Dockerin_1 Dockerin type I repeat 6.5E-06 16 20.50 79 167
EF-hand_8 EF-hand domain pair 2.6E-05 14 28.00 83 128
EF-hand_1 EF hand 0.37 0 25.40 111 129
EF-hand_6 EF-hand domain 0.42 1 25.00 116 129
EF-hand_8 EF-hand domain pair 2.7E-07 20 28.00 120 169
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0016 8 21.30 133 169
EF-hand_7 EF-hand domain pair 5.9E-08 23 30.00 137 169
EF-hand_5 EF hand 0.5 0 25.90 139 149
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0015 8 21.30 142 207
EF-hand_7 EF-hand domain pair 2.2E-12 37 30.00 144 207
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00079 9 21.40 144 204
EF-hand_6 EF-hand domain 8.8E-10 28 25.00 145 171
EF-hand_1 EF hand 2.8E-10 29 25.40 145 170
EF-hand_5 EF hand 1.2E-09 27 25.90 146 169
EF-hand_9 EF-hand domain 2.2E-05 14 37.00 149 208
EF-hand_8 EF-hand domain pair 1.1E-05 15 28.00 164 208
EF-hand_1 EF hand 8.8E-09 24 25.40 182 207
EF-hand_5 EF hand 0.00023 10 25.90 190 203
Dockerin_1 Dockerin type I repeat 0.46 0 20.50 190 198
EF-hand_6 EF-hand domain 0.00074 9 25.00 191 207

216

SR-25
Secretin_N_2
EF-hand_4
EF-hand_7
EF-hand_1
EF-hand_6
SPARC_Ca_bdg
EF-hand_5
EF-hand_9
EF-hand_8
Dockerin_1
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_4
EF-hand_7
EF-hand_5
EF-hand_4
EF-hand_7
SPARC_Ca_bdg
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_9
EF-hand_8
EF-hand_1
EF-hand_5
Dockerin_1
EF-hand_6

References:

EF-hand_5

EF-hand_9

EF-hand_8

EF-hand_7

EF-hand_6

SR-25
10708573 Molecular cloning and expression analysis of a putative nuclear protein, SR-25. Biochem Biophys Res Commun. 2000;269:444-450.
17952876 Dominant negative Rac1 attenuates paclitaxel-induced apoptosis in human melanoma cells through upregulation of heat shock protein 27: a functional proteomic analysis. Proteomics. 2007;7:4112-4122.

EF-hand_4

Secretin_N_2

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_1

Domain	Description	Evalue	Bits	GA	Start	End
SR-25	Nuclear RNA-splicing-associated protein	0.0056	6	55.00	17	44
Secretin_N_2	Secretin N-terminal domain	2.5E-05	15	22.00	19	78
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.56	0	21.30	62	86
EF-hand_7	EF-hand domain pair	3.2E-11	33	30.00	70	129
EF-hand_1	EF hand	2E-06	17	25.40	70	97
EF-hand_6	EF-hand domain	8.1E-08	22	25.00	71	96
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.047	4	21.40	71	99
EF-hand_5	EF hand	6.6E-06	15	25.90	72	94
EF-hand_9	EF-hand domain	0.0094	6	37.00	74	127
EF-hand_8	EF-hand domain pair	0.0011	9	28.00	75	88
Dockerin_1	Dockerin type I repeat	6.5E-06	16	20.50	79	167
EF-hand_8	EF-hand domain pair	2.6E-05	14	28.00	83	128
EF-hand_1	EF hand	0.37	0	25.40	111	129
EF-hand_6	EF-hand domain	0.42	1	25.00	116	129
EF-hand_8	EF-hand domain pair	2.7E-07	20	28.00	120	169
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0016	8	21.30	133	169
EF-hand_7	EF-hand domain pair	5.9E-08	23	30.00	137	169
EF-hand_5	EF hand	0.5	0	25.90	139	149
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0015	8	21.30	142	207
EF-hand_7	EF-hand domain pair	2.2E-12	37	30.00	144	207
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00079	9	21.40	144	204
EF-hand_6	EF-hand domain	8.8E-10	28	25.00	145	171
EF-hand_1	EF hand	2.8E-10	29	25.40	145	170
EF-hand_5	EF hand	1.2E-09	27	25.90	146	169
EF-hand_9	EF-hand domain	2.2E-05	14	37.00	149	208
EF-hand_8	EF-hand domain pair	1.1E-05	15	28.00	164	208
EF-hand_1	EF hand	8.8E-09	24	25.40	182	207
EF-hand_5	EF hand	0.00023	10	25.90	190	203
Dockerin_1	Dockerin type I repeat	0.46	0	20.50	190	198
EF-hand_6	EF-hand domain	0.00074	9	25.00	191	207