c2pfam

AT2G41500.1 :

Domain Description Evalue Bits GA Start End
BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 4.4E-05 13 27.00 69 124
PRP4 pre-mRNA processing factor 4 (PRP4) like 7E-15 44 25.00 126 154
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.094 2 22.90 251 283
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.00079 8 29.50 255 285
WD40 WD domain, G-beta repeat 0.00025 11 21.00 258 282
eIF2A Eukaryotic translation initiation factor eIF2A 0.00046 9 20.50 262 335
Nup160 Nucleoporin Nup120/160 0.033 2 19.20 276 328
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.035 2 29.50 290 326
WD40 WD domain, G-beta repeat 7.4E-06 16 21.00 290 326
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00025 11 22.90 306 378
WD40 WD domain, G-beta repeat 2.8E-08 24 21.00 330 367
PRP4 pre-mRNA processing factor 4 (PRP4) like 0.45 -1 25.00 336 344
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.62 -2 29.50 341 369
Nup160 Nucleoporin Nup120/160 0.14 0 19.20 353 372
WD40 WD domain, G-beta repeat 3.4E-07 20 21.00 378 409
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.042 4 22.90 378 420
WD40_like WD40-like domain 0.39 -1 40.00 383 419
Nup160 Nucleoporin Nup120/160 0.11 0 19.20 395 418
WD40 WD domain, G-beta repeat 5.3E-12 36 21.00 415 451
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.059 2 29.50 416 455
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 8.9E-06 15 22.90 420 473
eIF2A Eukaryotic translation initiation factor eIF2A 0.0025 7 20.50 425 490
WD40_like WD40-like domain 2.7E-06 16 40.00 425 477
eIF2A Eukaryotic translation initiation factor eIF2A 0.0024 7 20.50 429 490
Nup160 Nucleoporin Nup120/160 0.64 -2 19.20 444 481
WD40 WD domain, G-beta repeat 0.00061 10 21.00 457 494
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.025 4 22.90 464 514
STELLO STELLO glycosyltransferases 0.0001 10 27.70 466 521
WD40 WD domain, G-beta repeat 2.9E-07 21 21.00 499 535
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.31 1 22.90 503 536
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.059 2 29.50 507 537
Nup160 Nucleoporin Nup120/160 0.0091 4 19.20 513 535

554

BLOC1S3
PRP4
ANAPC4_WD40
Ge1_WD40
WD40
eIF2A
Nup160
Ge1_WD40
WD40
ANAPC4_WD40
WD40
PRP4
Ge1_WD40
Nup160
WD40
ANAPC4_WD40
WD40_like
Nup160
WD40
Ge1_WD40
ANAPC4_WD40
eIF2A
WD40_like
eIF2A
Nup160
WD40
ANAPC4_WD40
STELLO
WD40
ANAPC4_WD40
Ge1_WD40
Nup160

References:

ANAPC4_WD40

Ge1_WD40

WD40_like

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

STELLO

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

BLOC1S3

eIF2A
12133843 Characterization of mammalian eIF2A and identification of the yeast homolog. J Biol Chem. 2002;277:37079-37087.

PRP4

Domain	Description	Evalue	Bits	GA	Start	End
BLOC1S3	Biogenesis of lysosome-related organelles complex 1 subunit 3	4.4E-05	13	27.00	69	124
PRP4	pre-mRNA processing factor 4 (PRP4) like	7E-15	44	25.00	126	154
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.094	2	22.90	251	283
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.00079	8	29.50	255	285
WD40	WD domain, G-beta repeat	0.00025	11	21.00	258	282
eIF2A	Eukaryotic translation initiation factor eIF2A	0.00046	9	20.50	262	335
Nup160	Nucleoporin Nup120/160	0.033	2	19.20	276	328
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.035	2	29.50	290	326
WD40	WD domain, G-beta repeat	7.4E-06	16	21.00	290	326
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00025	11	22.90	306	378
WD40	WD domain, G-beta repeat	2.8E-08	24	21.00	330	367
PRP4	pre-mRNA processing factor 4 (PRP4) like	0.45	-1	25.00	336	344
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.62	-2	29.50	341	369
Nup160	Nucleoporin Nup120/160	0.14	0	19.20	353	372
WD40	WD domain, G-beta repeat	3.4E-07	20	21.00	378	409
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.042	4	22.90	378	420
WD40_like	WD40-like domain	0.39	-1	40.00	383	419
Nup160	Nucleoporin Nup120/160	0.11	0	19.20	395	418
WD40	WD domain, G-beta repeat	5.3E-12	36	21.00	415	451
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.059	2	29.50	416	455
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	8.9E-06	15	22.90	420	473
eIF2A	Eukaryotic translation initiation factor eIF2A	0.0025	7	20.50	425	490
WD40_like	WD40-like domain	2.7E-06	16	40.00	425	477
eIF2A	Eukaryotic translation initiation factor eIF2A	0.0024	7	20.50	429	490
Nup160	Nucleoporin Nup120/160	0.64	-2	19.20	444	481
WD40	WD domain, G-beta repeat	0.00061	10	21.00	457	494
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.025	4	22.90	464	514
STELLO	STELLO glycosyltransferases	0.0001	10	27.70	466	521
WD40	WD domain, G-beta repeat	2.9E-07	21	21.00	499	535
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.31	1	22.90	503	536
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.059	2	29.50	507	537
Nup160	Nucleoporin Nup120/160	0.0091	4	19.20	513	535