c2pfam

AT2G41680.1 :

Domain Description Evalue Bits GA Start End
Thi4 Thi4 family 1.4E-06 19 20.00 84 125
GIDA Glucose inhibited division protein A 1.2E-05 15 20.00 85 112
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.91 -1 21.00 85 113
FAD_binding_3 FAD binding domain 0.0024 8 20.10 85 101
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 0 154 22.80 85 380
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 0.042 5 22.00 85 112
HI0933_like HI0933-like protein 1.3E-05 15 20.30 85 115
NAD_binding_7 Putative NAD(P)-binding 0.33 2 22.10 85 112
Trp_halogenase Tryptophan halogenase 0.0003 11 19.60 85 106
DAO FAD dependent oxidoreductase 0.00015 12 24.70 86 115
FAD_binding_2 FAD binding domain 5.1E-10 30 20.40 86 320
FAD_oxidored FAD dependent oxidoreductase 9.1E-08 23 27.00 86 136
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 7.7E-05 13 30.00 87 117
NAD_binding_8 NAD(P)-binding Rossmann-like domain 8E-06 17 21.90 88 128
HI0933_like HI0933-like protein 0.0011 9 20.30 137 197
DAO FAD dependent oxidoreductase 0.00039 11 24.70 144 238
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 2.7E-19 60 30.00 163 363
GIDA Glucose inhibited division protein A 0.84 -1 20.00 163 196
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.0026 8 21.00 176 267
NAD_binding_7 Putative NAD(P)-binding 0.004 9 22.10 228 262
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 2.1E-17 54 22.00 232 305
NAD_binding_8 NAD(P)-binding Rossmann-like domain 0.61 1 21.90 234 264
GIDA Glucose inhibited division protein A 0.053 3 20.00 261 305
FAD_binding_3 FAD binding domain 0.059 3 20.10 263 421
Thioredoxin_2 Thioredoxin-like domain 0.8 1 27.00 266 345
FAD_oxidored FAD dependent oxidoreductase 0.033 4 27.00 266 318
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.05 3 21.00 281 329
FAD_binding_2 FAD binding domain 0.69 0 20.40 349 366
GIDA Glucose inhibited division protein A 0.11 2 20.00 355 392
T4_deiodinase Iodothyronine deiodinase 0.00063 10 20.50 438 485
Thioredoxin_7 Thioredoxin-like 0.00011 13 27.00 440 503
TraF F plasmid transfer operon protein 2.9E-05 15 23.00 441 490
Thioredoxin Thioredoxin 4.2E-19 59 22.10 441 526
Thioredoxin_4 Thioredoxin 6.8E-05 14 23.20 443 488
Thioredoxin_8 Thioredoxin-like 3.2E-05 15 27.00 443 487
Thioredoxin_2 Thioredoxin-like domain 1.6E-06 19 27.00 444 523
DUF836 Glutaredoxin-like domain (DUF836) 7.6E-06 17 21.00 446 490
Thioredoxin_3 Thioredoxin domain 2.4E-06 18 24.80 447 502
Glutaredoxin Glutaredoxin 5.7E-09 27 20.90 447 500
Thioredoxin_5 Thioredoxin 0.0011 9 27.00 448 477
OST3_OST6 OST3 / OST6 family 6.3E-06 17 21.30 453 507
HyaE Hydrogenase-1 expression protein HyaE 0.00049 11 20.80 464 521
Thioredoxin_5 Thioredoxin 0.03 5 27.00 482 519

529

Thi4
GIDA
K_oxygenase
FAD_binding_3
Pyr_redox_2
Pyr_redox
HI0933_like
NAD_binding_7
Trp_halogenase
DAO
FAD_binding_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
HI0933_like
DAO
Pyr_redox_3
GIDA
K_oxygenase
NAD_binding_7
Pyr_redox
NAD_binding_8
GIDA
FAD_binding_3
Thioredoxin_2
FAD_oxidored
K_oxygenase
FAD_binding_2
GIDA
T4_deiodinase
Thioredoxin_7
TraF
Thioredoxin
Thioredoxin_4
Thioredoxin_8
Thioredoxin_2
DUF836
Thioredoxin_3
Glutaredoxin
Thioredoxin_5
OST3_OST6
HyaE
Thioredoxin_5

References:

Pyr_redox
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

HI0933_like

FAD_binding_3
1409567 Crystal structure of the reduced form of p-hydroxybenzoate hydroxylase refined at 2.3A resolution. Proteins 1992;14:178-190.

Pyr_redox_3

Trp_halogenase
10547442 Conservation of the pyrrolnitrin biosynthetic gene cluster among six pyrrolnitrin-producing strains. FEMS Microbiol Lett 1999;180:39-44.

Pyr_redox_2
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

Thioredoxin

T4_deiodinase
16131321 Cellular and structural biology of the deiodinases. Thyroid. 2005;15:777-786.

NAD_binding_8

NAD_binding_7

Thioredoxin_5

Thioredoxin_4

Thioredoxin_3

Thioredoxin_2

Thioredoxin_8

Thi4
7961415 Cloning, nucleotide sequence, and regulation of Schizosaccharomyces pombe thi4, a thiamine biosynthetic gene. J Bacteriol 1994;176:6631-6635.

FAD_binding_2
8061609 Structure of glutathione reductase from Escherichia coli at 1.86 A resolution: comparison with the enzyme from human erythrocytes. Protein Sci 1994;3:799-809.

K_oxygenase

Glutaredoxin

Thioredoxin_7

OST3_OST6
7622558 Functional characterization of Ost3p. Loss of the 34-kD subunit of the Saccharomyces cerevisiae oligosaccharyltransferase results in biased underglycosylation of acceptor substrates. J Cell Biol 1995;130:567-577.
10358084 The oligosaccharyltransferase complex from Saccharomyces cerevisiae. Isolation of the OST6 gene, its synthetic interaction with OST3, and analysis of the native complex. J Biol Chem 1999;274:17249-17256.

HyaE
12914940 Assembly of Tat-dependent [NiFe] hydrogenases: identification of precursor-binding accessory proteins. FEBS Lett 2003;549:141-146.

DAO
9153426 Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry 1997;36:5853-5860.

GIDA

DUF836

TraF

FAD_oxidored

Domain	Description	Evalue	Bits	GA	Start	End
Thi4	Thi4 family	1.4E-06	19	20.00	84	125
GIDA	Glucose inhibited division protein A	1.2E-05	15	20.00	85	112
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.91	-1	21.00	85	113
FAD_binding_3	FAD binding domain	0.0024	8	20.10	85	101
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	0	154	22.80	85	380
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	0.042	5	22.00	85	112
HI0933_like	HI0933-like protein	1.3E-05	15	20.30	85	115
NAD_binding_7	Putative NAD(P)-binding	0.33	2	22.10	85	112
Trp_halogenase	Tryptophan halogenase	0.0003	11	19.60	85	106
DAO	FAD dependent oxidoreductase	0.00015	12	24.70	86	115
FAD_binding_2	FAD binding domain	5.1E-10	30	20.40	86	320
FAD_oxidored	FAD dependent oxidoreductase	9.1E-08	23	27.00	86	136
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	7.7E-05	13	30.00	87	117
NAD_binding_8	NAD(P)-binding Rossmann-like domain	8E-06	17	21.90	88	128
HI0933_like	HI0933-like protein	0.0011	9	20.30	137	197
DAO	FAD dependent oxidoreductase	0.00039	11	24.70	144	238
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	2.7E-19	60	30.00	163	363
GIDA	Glucose inhibited division protein A	0.84	-1	20.00	163	196
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.0026	8	21.00	176	267
NAD_binding_7	Putative NAD(P)-binding	0.004	9	22.10	228	262
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	2.1E-17	54	22.00	232	305
NAD_binding_8	NAD(P)-binding Rossmann-like domain	0.61	1	21.90	234	264
GIDA	Glucose inhibited division protein A	0.053	3	20.00	261	305
FAD_binding_3	FAD binding domain	0.059	3	20.10	263	421
Thioredoxin_2	Thioredoxin-like domain	0.8	1	27.00	266	345
FAD_oxidored	FAD dependent oxidoreductase	0.033	4	27.00	266	318
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.05	3	21.00	281	329
FAD_binding_2	FAD binding domain	0.69	0	20.40	349	366
GIDA	Glucose inhibited division protein A	0.11	2	20.00	355	392
T4_deiodinase	Iodothyronine deiodinase	0.00063	10	20.50	438	485
Thioredoxin_7	Thioredoxin-like	0.00011	13	27.00	440	503
TraF	F plasmid transfer operon protein	2.9E-05	15	23.00	441	490
Thioredoxin	Thioredoxin	4.2E-19	59	22.10	441	526
Thioredoxin_4	Thioredoxin	6.8E-05	14	23.20	443	488
Thioredoxin_8	Thioredoxin-like	3.2E-05	15	27.00	443	487
Thioredoxin_2	Thioredoxin-like domain	1.6E-06	19	27.00	444	523
DUF836	Glutaredoxin-like domain (DUF836)	7.6E-06	17	21.00	446	490
Thioredoxin_3	Thioredoxin domain	2.4E-06	18	24.80	447	502
Glutaredoxin	Glutaredoxin	5.7E-09	27	20.90	447	500
Thioredoxin_5	Thioredoxin	0.0011	9	27.00	448	477
OST3_OST6	OST3 / OST6 family	6.3E-06	17	21.30	453	507
HyaE	Hydrogenase-1 expression protein HyaE	0.00049	11	20.80	464	521
Thioredoxin_5	Thioredoxin	0.03	5	27.00	482	519