c2pfam

AT1G11650.1 :

Domain Description Evalue Bits GA Start End
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.2E-14 43 20.70 64 129
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.014 4 27.00 86 128
RRM_7 RNA recognition motif 0.077 2 27.00 97 122
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.4 -1 27.00 101 118
RRM_7 RNA recognition motif 0.0014 7 27.00 157 207
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.2E-17 49 20.70 157 219
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.0092 4 27.00 196 237
RRM_3 RNA binding motif 0.72 -2 21.30 199 215
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4.2E-06 15 27.00 253 293
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00014 10 27.00 260 304
RRM_7 RNA recognition motif 2E-06 17 27.00 262 294
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.1E-12 36 20.70 263 305
RRM_3 RNA binding motif 3.4E-06 16 21.30 263 305

306

RRM_1
RRM_5
RRM_7
Nup35_RRM_2
RRM_7
RRM_1
RRM_5
RRM_3
RRM_5
Nup35_RRM_2
RRM_7
RRM_1
RRM_3

References:

RRM_7

RRM_5

Nup35_RRM_2

RRM_3
12842046 Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element. Structure. 2003;11:833-843.

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

Domain	Description	Evalue	Bits	GA	Start	End
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.2E-14	43	20.70	64	129
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.014	4	27.00	86	128
RRM_7	RNA recognition motif	0.077	2	27.00	97	122
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.4	-1	27.00	101	118
RRM_7	RNA recognition motif	0.0014	7	27.00	157	207
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	8.2E-17	49	20.70	157	219
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.0092	4	27.00	196	237
RRM_3	RNA binding motif	0.72	-2	21.30	199	215
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	4.2E-06	15	27.00	253	293
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00014	10	27.00	260	304
RRM_7	RNA recognition motif	2E-06	17	27.00	262	294
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.1E-12	36	20.70	263	305
RRM_3	RNA binding motif	3.4E-06	16	21.30	263	305