c2pfam

AT2G43130.1 :

Domain Description Evalue Bits GA Start End
Arf ADP-ribosylation factor family 1.2E-17 53 20.30 13 171
MMR_HSR1 GTPase of unknown function 9.8E-08 21 24.50 14 103
Ras Ras family 0 208 20.80 14 174
Roc Ras of Complex, Roc, domain of DAPkinase 8.6E-37 115 27.00 14 129
SRPRB Signal recognition particle receptor beta subunit 8.2E-05 11 20.50 14 79
TniB Bacterial TniB protein 5.3E-05 12 20.10 14 38
RsgA_GTPase RsgA GTPase 0.00068 9 30.00 15 35
GTP_EFTU Elongation factor Tu GTP binding domain 1.1E-05 14 20.20 49 172
RsgA_GTPase RsgA GTPase 0.09 2 30.00 113 164
SRPRB Signal recognition particle receptor beta subunit 0.016 4 20.50 131 177

214

Arf
MMR_HSR1
Ras
Roc
SRPRB
TniB
RsgA_GTPase
GTP_EFTU
RsgA_GTPase
SRPRB

References:

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

TniB
8195081 Transposon Tn5090 of plasmid R751, which carries an integron, is related to Tn7, Mu, and the retroelements. J Bacteriol 1994;176:3257-3268.
8594337 Four genes, two ends, and a res region are involved in transposition of Tn5053: a paradigm for a novel family of transposons carrying either a mer operon or an integron. Mol Microbiol 1995;17:1189-1200.

SRPRB
7844142 The beta subunit of the signal recognition particle receptor is a transmembrane GTPase that anchors the alpha subunit, a peripheral membrane GTPase, to the endoplasmic reticulum membrane. J Cell Biol. 1995;128:273-282.

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

RsgA_GTPase

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

Roc

Domain	Description	Evalue	Bits	GA	Start	End
Arf	ADP-ribosylation factor family	1.2E-17	53	20.30	13	171
MMR_HSR1	GTPase of unknown function	9.8E-08	21	24.50	14	103
Ras	Ras family	0	208	20.80	14	174
Roc	Ras of Complex, Roc, domain of DAPkinase	8.6E-37	115	27.00	14	129
SRPRB	Signal recognition particle receptor beta subunit	8.2E-05	11	20.50	14	79
TniB	Bacterial TniB protein	5.3E-05	12	20.10	14	38
RsgA_GTPase	RsgA GTPase	0.00068	9	30.00	15	35
GTP_EFTU	Elongation factor Tu GTP binding domain	1.1E-05	14	20.20	49	172
RsgA_GTPase	RsgA GTPase	0.09	2	30.00	113	164
SRPRB	Signal recognition particle receptor beta subunit	0.016	4	20.50	131	177