c2pfam

AT2G44180.1 :

Domain Description Evalue Bits GA Start End
AAA_13 AAA domain 0.00033 9 36.00 7 128
Het-C Heterokaryon incompatibility protein Het-C 0.00016 10 20.60 9 171
RNA_polI_A34 DNA-directed RNA polymerase I subunit RPA34.5 7.8E-05 12 21.40 17 76
Vfa1 AAA-ATPase Vps4-associated protein 1 0.00047 10 24.20 19 144
DUF3391 Domain of unknown function (DUF3391) 0.0017 8 27.80 31 151
CDC45 CDC45-like protein 0.00041 8 26.70 32 166
CPSF100_C Cleavage and polyadenylation factor 2 C-terminal 0.0009 9 23.60 40 95
Ric8 Guanine nucleotide exchange factor synembryn 0.00025 9 25.30 114 153
Peptidase_M24 Metallopeptidase family M24 0 141 20.70 131 428

441

AAA_13
Het-C
RNA_polI_A34
Vfa1
DUF3391
CDC45
CPSF100_C
Ric8
Peptidase_M24

References:

CPSF100_C

DUF3391

AAA_13

RNA_polI_A34
9121426 A34.5, a nonessential component of yeast RNA polymerase I, cooperates with subunit A14 and DNA topoisomerase I to produce a functional rRNA synthesis machine. Mol Cell Biol 1997;17:1787-1795.

Het-C
9770498 Evidence for balancing selection operating at the het-c heterokaryon incompatibility locus in a group of filamentous fungi. Proc Natl Acad Sci U S A 1998;95:12398-12403.

Ric8
10985349 RIC-8 (Synembryn): a novel conserved protein that is required for G(q)alpha signaling in the C. elegans nervous system. Neuron. 2000;27:289-299.
12971991 Expression of ric-8 (synembryn) gene in the nervous system of developing and adult mouse. Gene Expr Patterns. 2003;3:591-594.

Peptidase_M24
8471602 Structure of the cobalt-dependent methionine aminopeptidase from Escherichia coli: a new type of proteolytic enzyme. Biochemistry 1993;32:3907-3912.
7674922 Evolutionary families of metallopeptidases. Meth Enzymol 1995;248:183-228.
18579787 The FACT Spt16 "peptidase" domain is a histone H3-H4 binding module. Proc Natl Acad Sci U S A. 2008;105:8884-8889.

CDC45
9660782 The human homolog of Saccharomyces cerevisiae CDC45. J Biol Chem 1998;273:18205-18209.

Vfa1

Domain	Description	Evalue	Bits	GA	Start	End
AAA_13	AAA domain	0.00033	9	36.00	7	128
Het-C	Heterokaryon incompatibility protein Het-C	0.00016	10	20.60	9	171
RNA_polI_A34	DNA-directed RNA polymerase I subunit RPA34.5	7.8E-05	12	21.40	17	76
Vfa1	AAA-ATPase Vps4-associated protein 1	0.00047	10	24.20	19	144
DUF3391	Domain of unknown function (DUF3391)	0.0017	8	27.80	31	151
CDC45	CDC45-like protein	0.00041	8	26.70	32	166
CPSF100_C	Cleavage and polyadenylation factor 2 C-terminal	0.0009	9	23.60	40	95
Ric8	Guanine nucleotide exchange factor synembryn	0.00025	9	25.30	114	153
Peptidase_M24	Metallopeptidase family M24	0	141	20.70	131	428