c2pfam

AT2G45200.1 :

Domain Description Evalue Bits GA Start End
Laminin_II Laminin Domain II 0.021 4 27.70 56 80
Rx_N Rx N-terminal domain 0.29 1 27.70 58 100
CK2S Casein Kinase 2 substrate 0.00012 11 27.00 59 143
DUF2408 Protein of unknown function (DUF2408) 5.9E-05 13 25.00 62 142
Laminin_II Laminin Domain II 0.0035 7 27.70 63 138
DUF724 Protein of unknown function (DUF724) 6.4E-05 12 23.40 67 135
CorA CorA-like Mg2+ transporter protein 7.2E-05 12 26.00 69 138
Sec34 Sec34-like family 0.0012 8 25.00 69 124
Rx_N Rx N-terminal domain 0.23 1 27.70 103 137
HEF_HK HEF_HK domain 0.00072 10 24.10 104 133
TM1506 Domain of unknown function (DUF1893) 0.00012 11 20.50 133 189
V-SNARE_C Snare region anchored in the vesicle membrane C-terminus 2.5E-21 65 24.80 150 214
Laminin_II Laminin Domain II 0.0001 12 27.70 156 223
Sec34 Sec34-like family 0.044 3 25.00 159 197
Rx_N Rx N-terminal domain 0.00059 10 27.70 177 218

239

Laminin_II
Rx_N
CK2S
DUF2408
Laminin_II
DUF724
CorA
Sec34
Rx_N
HEF_HK
TM1506
V-SNARE_C
Laminin_II
Sec34
Rx_N

References:

DUF2408

V-SNARE_C
19064671 Binding interactions control SNARE specificity in vivo. J Cell Biol. 2008;183:1089-1100.

TM1506

CK2S

Laminin_II
3182802 Laminin, a multidomain protein. The A chain has a unique globular domain and homology with the basement membrane proteoglycan and the laminin B chains. J Biol Chem 1988;263:16536-16544.

Sec34
11703943 The Sec34/35 Golgi transport complex is related to the exocyst, defining a family of complexes involved in multiple steps of membrane traffic. Dev Cell 2001;1:527-537.

DUF724

CorA
9775386 The CorA magnesium transporter gene family. Microb Comp Genomics 1998;3:151-169.
9786860 The CorA Mg2+ transport protein of Salmonella typhimurium. Mutagenesis of conserved residues in the third membrane domain identifies a Mg2+ pore. J Biol Chem 1998;273:28663-28669.
1551905 The nuclear gene MRS2 is essential for the excision of group II introns from yeast mitochondrial transcripts in vivo. J Biol Chem 1992;267:6963-6969.

Rx_N

HEF_HK

Domain	Description	Evalue	Bits	GA	Start	End
Laminin_II	Laminin Domain II	0.021	4	27.70	56	80
Rx_N	Rx N-terminal domain	0.29	1	27.70	58	100
CK2S	Casein Kinase 2 substrate	0.00012	11	27.00	59	143
DUF2408	Protein of unknown function (DUF2408)	5.9E-05	13	25.00	62	142
Laminin_II	Laminin Domain II	0.0035	7	27.70	63	138
DUF724	Protein of unknown function (DUF724)	6.4E-05	12	23.40	67	135
CorA	CorA-like Mg2+ transporter protein	7.2E-05	12	26.00	69	138
Sec34	Sec34-like family	0.0012	8	25.00	69	124
Rx_N	Rx N-terminal domain	0.23	1	27.70	103	137
HEF_HK	HEF_HK domain	0.00072	10	24.10	104	133
TM1506	Domain of unknown function (DUF1893)	0.00012	11	20.50	133	189
V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	2.5E-21	65	24.80	150	214
Laminin_II	Laminin Domain II	0.0001	12	27.70	156	223
Sec34	Sec34-like family	0.044	3	25.00	159	197
Rx_N	Rx N-terminal domain	0.00059	10	27.70	177	218