c2pfam

AT2G48100.1 :

Domain Description Evalue Bits GA Start End
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 9.3E-06 15 26.90 10 42
zf-C2H2 Zinc finger, C2H2 type 6.6E-06 16 20.80 17 41
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 0.00012 11 22.60 17 37
zf-C2H2_4 C2H2-type zinc finger 0.00068 10 27.00 17 37
zf-C2H2_8 C2H2-type zinc ribbon 0.00052 9 30.00 18 70
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 0.0011 8 26.90 43 71
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 0.042 3 22.60 45 66
zf-C2H2 Zinc finger, C2H2 type 0.028 4 20.80 47 67
zf-C2H2_4 C2H2-type zinc finger 0.046 4 27.00 47 66
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 0.083 2 26.90 81 106
zf-C2H2 Zinc finger, C2H2 type 0.11 2 20.80 85 106
zf-C2H2_4 C2H2-type zinc finger 0.024 5 27.00 85 106
DNA_pol_A_exo1 3'-5' exonuclease 0.36 -1 23.20 130 168
RNase_T Exonuclease 6.1E-16 48 21.10 134 290
DNA_pol_A_exo1 3'-5' exonuclease 8E-05 11 23.20 219 276
zf-C2H2_8 C2H2-type zinc ribbon 0.023 4 30.00 263 305

344

zf-C2H2_2
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_8
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2
zf-C2H2_4
zf-C2H2_2
zf-C2H2
zf-C2H2_4
DNA_pol_A_exo1
RNase_T
DNA_pol_A_exo1
zf-C2H2_8

References:

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

zf-C2H2_4

zf-C2H2_2

DNA_pol_A_exo1

RNase_T

zf-C2H2_8

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	9.3E-06	15	26.90	10	42
zf-C2H2	Zinc finger, C2H2 type	6.6E-06	16	20.80	17	41
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	0.00012	11	22.60	17	37
zf-C2H2_4	C2H2-type zinc finger	0.00068	10	27.00	17	37
zf-C2H2_8	C2H2-type zinc ribbon	0.00052	9	30.00	18	70
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	0.0011	8	26.90	43	71
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	0.042	3	22.60	45	66
zf-C2H2	Zinc finger, C2H2 type	0.028	4	20.80	47	67
zf-C2H2_4	C2H2-type zinc finger	0.046	4	27.00	47	66
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	0.083	2	26.90	81	106
zf-C2H2	Zinc finger, C2H2 type	0.11	2	20.80	85	106
zf-C2H2_4	C2H2-type zinc finger	0.024	5	27.00	85	106
DNA_pol_A_exo1	3'-5' exonuclease	0.36	-1	23.20	130	168
RNase_T	Exonuclease	6.1E-16	48	21.10	134	290
DNA_pol_A_exo1	3'-5' exonuclease	8E-05	11	23.20	219	276
zf-C2H2_8	C2H2-type zinc ribbon	0.023	4	30.00	263	305