c2pfam

AT1G12280.1 :

Domain Description Evalue Bits GA Start End
RsgA_GTPase RsgA GTPase 0.00016 11 30.00 121 200
NB-ARC NB-ARC domain 0 262 23.50 160 401
ATPase_2 ATPase domain predominantly from Archaea 8.1E-06 15 33.20 162 224
AAA_16 AAA ATPase domain 5.6E-07 20 32.60 163 210
AAA_30 AAA domain 0.00021 11 27.00 168 209
AAA_22 AAA domain 0.00038 10 27.00 177 240
NACHT NACHT domain 1.5E-05 14 20.40 179 267
LRR_8 Leucine rich repeat 0.0014 8 27.00 513 549
LRR_4 Leucine Rich repeats (2 copies) 0.067 3 27.00 521 551
LRR_8 Leucine rich repeat 9.6E-13 37 27.00 539 598
LRR_4 Leucine Rich repeats (2 copies) 3.4E-06 17 27.00 563 595
LRR_1 Leucine Rich Repeat 0.0015 9 20.60 565 586
LRR_1 Leucine Rich Repeat 0.032 5 20.60 588 603
LRR_8 Leucine rich repeat 4.2E-05 13 27.00 589 619
LRR_4 Leucine Rich repeats (2 copies) 0.0014 9 27.00 599 631
LRR_8 Leucine rich repeat 0.013 5 27.00 607 640
LRR_4 Leucine Rich repeats (2 copies) 0.0023 8 27.00 610 640
LRR_4 Leucine Rich repeats (2 copies) 0.36 1 27.00 634 667
LRR_4 Leucine Rich repeats (2 copies) 0.0042 7 27.00 746 777
LRR_8 Leucine rich repeat 0.15 1 27.00 746 765
LRR_4 Leucine Rich repeats (2 copies) 0.00073 10 27.00 800 841
LRR_1 Leucine Rich Repeat 0.77 1 20.60 826 841

894

RsgA_GTPase
NB-ARC
ATPase_2
AAA_16
AAA_30
AAA_22
NACHT
LRR_8
LRR_4
LRR_8
LRR_4
LRR_1
LRR_1
LRR_8
LRR_4
LRR_8
LRR_4
LRR_4
LRR_4
LRR_8
LRR_4
LRR_1

References:

AAA_16

NACHT
10782090 The NACHT family - a new group of predicted NTPases implicated in apoptosis and MHC transcription activation. Trends Biochem Sci 2000;25:223-224.

LRR_4

AAA_30

ATPase_2

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

RsgA_GTPase

AAA_22

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

Domain	Description	Evalue	Bits	GA	Start	End
RsgA_GTPase	RsgA GTPase	0.00016	11	30.00	121	200
NB-ARC	NB-ARC domain	0	262	23.50	160	401
ATPase_2	ATPase domain predominantly from Archaea	8.1E-06	15	33.20	162	224
AAA_16	AAA ATPase domain	5.6E-07	20	32.60	163	210
AAA_30	AAA domain	0.00021	11	27.00	168	209
AAA_22	AAA domain	0.00038	10	27.00	177	240
NACHT	NACHT domain	1.5E-05	14	20.40	179	267
LRR_8	Leucine rich repeat	0.0014	8	27.00	513	549
LRR_4	Leucine Rich repeats (2 copies)	0.067	3	27.00	521	551
LRR_8	Leucine rich repeat	9.6E-13	37	27.00	539	598
LRR_4	Leucine Rich repeats (2 copies)	3.4E-06	17	27.00	563	595
LRR_1	Leucine Rich Repeat	0.0015	9	20.60	565	586
LRR_1	Leucine Rich Repeat	0.032	5	20.60	588	603
LRR_8	Leucine rich repeat	4.2E-05	13	27.00	589	619
LRR_4	Leucine Rich repeats (2 copies)	0.0014	9	27.00	599	631
LRR_8	Leucine rich repeat	0.013	5	27.00	607	640
LRR_4	Leucine Rich repeats (2 copies)	0.0023	8	27.00	610	640
LRR_4	Leucine Rich repeats (2 copies)	0.36	1	27.00	634	667
LRR_4	Leucine Rich repeats (2 copies)	0.0042	7	27.00	746	777
LRR_8	Leucine rich repeat	0.15	1	27.00	746	765
LRR_4	Leucine Rich repeats (2 copies)	0.00073	10	27.00	800	841
LRR_1	Leucine Rich Repeat	0.77	1	20.60	826	841