c2pfam

AT2G02220.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 8E-13 38 20.70 33 71
LRR_4 Leucine Rich repeats (2 copies) 7.9E-05 13 27.00 79 114
LRR_8 Leucine rich repeat 7.8E-08 22 27.00 81 136
LRR_8 Leucine rich repeat 4.5E-10 29 27.00 102 159
LRR_1 Leucine Rich Repeat 0.015 6 20.60 103 122
LRR_4 Leucine Rich repeats (2 copies) 1.2E-08 25 27.00 124 163
LRR_1 Leucine Rich Repeat 0.00025 11 20.60 125 144
LRR_8 Leucine rich repeat 0.0036 7 27.00 145 161
LRR_1 Leucine Rich Repeat 0.027 5 20.60 149 169
LRR_8 Leucine rich repeat 0.00017 11 27.00 177 232
LRR_8 Leucine rich repeat 1.9E-05 14 27.00 198 255
LRR_4 Leucine Rich repeats (2 copies) 0.014 6 27.00 198 235
LRR_1 Leucine Rich Repeat 0.6 1 20.60 198 218
LRR_4 Leucine Rich repeats (2 copies) 0.16 2 27.00 220 254
LRR_8 Leucine rich repeat 0.0011 8 27.00 241 272
LRR_1 Leucine Rich Repeat 0.016 6 20.60 245 266
LRR_8 Leucine rich repeat 0.0061 6 27.00 283 327
LRR_4 Leucine Rich repeats (2 copies) 0.24 2 27.00 292 332
LRR_1 Leucine Rich Repeat 0.54 1 20.60 294 306
LRR_4 Leucine Rich repeats (2 copies) 0.081 3 27.00 318 350
LRR_4 Leucine Rich repeats (2 copies) 0.0072 6 27.00 340 379
LRR_8 Leucine rich repeat 2.7E-06 17 27.00 341 380
LRR_1 Leucine Rich Repeat 0.42 1 20.60 341 363
LRR_4 Leucine Rich repeats (2 copies) 0.012 6 27.00 365 397
LRR_8 Leucine rich repeat 3.9E-09 26 27.00 391 451
LRR_4 Leucine Rich repeats (2 copies) 0.0043 7 27.00 416 449
LRR_1 Leucine Rich Repeat 0.086 4 20.60 416 436
LRR_1 Leucine Rich Repeat 0.002 9 20.60 441 459
LRR_4 Leucine Rich repeats (2 copies) 5.3E-06 16 27.00 441 478
LRR_8 Leucine rich repeat 1.5E-07 21 27.00 449 491
LRR_4 Leucine Rich repeats (2 copies) 0.00037 11 27.00 467 490
LRR_1 Leucine Rich Repeat 0.00063 10 20.60 467 486
LRR_1 Leucine Rich Repeat 1 0 20.60 528 546
LRR_4 Leucine Rich repeats (2 copies) 0.0066 7 27.00 528 562
LRR_8 Leucine rich repeat 1.6E-11 33 27.00 528 583
LRR_1 Leucine Rich Repeat 0.034 5 20.60 548 569
LRR_4 Leucine Rich repeats (2 copies) 2.9E-06 17 27.00 571 608
LRR_1 Leucine Rich Repeat 0.00039 11 20.60 572 594
Rax2 Cortical protein marker for cell polarity 7.3E-06 15 27.80 647 701
ABC1 ABC1 family 3.9E-05 13 20.60 734 764
Pkinase Protein kinase domain 0 147 20.40 736 1003
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 141 23.10 738 1003
APH Phosphotransferase enzyme family 6.5E-06 16 22.40 820 888
Pkinase_fungal Fungal protein kinase 4.2E-06 15 24.10 841 926

1008

LRRNT_2
LRR_4
LRR_8
LRR_8
LRR_1
LRR_4
LRR_1
LRR_8
LRR_1
LRR_8
LRR_8
LRR_4
LRR_1
LRR_4
LRR_8
LRR_1
LRR_8
LRR_4
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_1
LRR_4
LRR_1
Rax2
ABC1
Pkinase
PK_Tyr_Ser-Thr
APH
Pkinase_fungal

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Pkinase_fungal

Rax2

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	8E-13	38	20.70	33	71
LRR_4	Leucine Rich repeats (2 copies)	7.9E-05	13	27.00	79	114
LRR_8	Leucine rich repeat	7.8E-08	22	27.00	81	136
LRR_8	Leucine rich repeat	4.5E-10	29	27.00	102	159
LRR_1	Leucine Rich Repeat	0.015	6	20.60	103	122
LRR_4	Leucine Rich repeats (2 copies)	1.2E-08	25	27.00	124	163
LRR_1	Leucine Rich Repeat	0.00025	11	20.60	125	144
LRR_8	Leucine rich repeat	0.0036	7	27.00	145	161
LRR_1	Leucine Rich Repeat	0.027	5	20.60	149	169
LRR_8	Leucine rich repeat	0.00017	11	27.00	177	232
LRR_8	Leucine rich repeat	1.9E-05	14	27.00	198	255
LRR_4	Leucine Rich repeats (2 copies)	0.014	6	27.00	198	235
LRR_1	Leucine Rich Repeat	0.6	1	20.60	198	218
LRR_4	Leucine Rich repeats (2 copies)	0.16	2	27.00	220	254
LRR_8	Leucine rich repeat	0.0011	8	27.00	241	272
LRR_1	Leucine Rich Repeat	0.016	6	20.60	245	266
LRR_8	Leucine rich repeat	0.0061	6	27.00	283	327
LRR_4	Leucine Rich repeats (2 copies)	0.24	2	27.00	292	332
LRR_1	Leucine Rich Repeat	0.54	1	20.60	294	306
LRR_4	Leucine Rich repeats (2 copies)	0.081	3	27.00	318	350
LRR_4	Leucine Rich repeats (2 copies)	0.0072	6	27.00	340	379
LRR_8	Leucine rich repeat	2.7E-06	17	27.00	341	380
LRR_1	Leucine Rich Repeat	0.42	1	20.60	341	363
LRR_4	Leucine Rich repeats (2 copies)	0.012	6	27.00	365	397
LRR_8	Leucine rich repeat	3.9E-09	26	27.00	391	451
LRR_4	Leucine Rich repeats (2 copies)	0.0043	7	27.00	416	449
LRR_1	Leucine Rich Repeat	0.086	4	20.60	416	436
LRR_1	Leucine Rich Repeat	0.002	9	20.60	441	459
LRR_4	Leucine Rich repeats (2 copies)	5.3E-06	16	27.00	441	478
LRR_8	Leucine rich repeat	1.5E-07	21	27.00	449	491
LRR_4	Leucine Rich repeats (2 copies)	0.00037	11	27.00	467	490
LRR_1	Leucine Rich Repeat	0.00063	10	20.60	467	486
LRR_1	Leucine Rich Repeat	1	0	20.60	528	546
LRR_4	Leucine Rich repeats (2 copies)	0.0066	7	27.00	528	562
LRR_8	Leucine rich repeat	1.6E-11	33	27.00	528	583
LRR_1	Leucine Rich Repeat	0.034	5	20.60	548	569
LRR_4	Leucine Rich repeats (2 copies)	2.9E-06	17	27.00	571	608
LRR_1	Leucine Rich Repeat	0.00039	11	20.60	572	594
Rax2	Cortical protein marker for cell polarity	7.3E-06	15	27.80	647	701
ABC1	ABC1 family	3.9E-05	13	20.60	734	764
Pkinase	Protein kinase domain	0	147	20.40	736	1003
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	141	23.10	738	1003
APH	Phosphotransferase enzyme family	6.5E-06	16	22.40	820	888
Pkinase_fungal	Fungal protein kinase	4.2E-06	15	24.10	841	926