c2pfam

AT2G27170.1 :

Domain Description Evalue Bits GA Start End
AAA_15 AAA ATPase domain 1E-13 40 32.10 1 409
SMC_N RecF/RecN/SMC N terminal domain 0 203 40.00 2 1180
AAA_23 AAA domain 1.3E-13 41 27.00 6 344
AAA_29 P-loop containing region of AAA domain 2.9E-05 13 27.00 25 49
ABC_tran ABC transporter 0.0012 8 23.10 26 48
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 1.3E-08 24 27.00 27 51
SMC_hinge SMC proteins Flexible Hinge Domain 3.9E-33 103 21.60 522 633
AAA_15 AAA ATPase domain 0.022 3 32.10 747 1160
AAA_23 AAA domain 0.17 1 27.00 926 1015
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 2.9E-11 33 27.00 1049 1160
ABC_tran ABC transporter 0.001 9 23.10 1089 1116

1204

AAA_15
SMC_N
AAA_23
AAA_29
ABC_tran
AAA_21
SMC_hinge
AAA_15
AAA_23
AAA_21
ABC_tran

References:

AAA_15

AAA_29

SMC_N
10429180 Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions. Eur J Biochem 1999;263:6-13.
9640531 SMC protein complexes and higher-order chromosome dynamics. Curr Opin Cell Biol 1998;10:317-322.

SMC_hinge
12411491 Hinge-mediated dimerization of SMC protein is essential for its dynamic interaction with DNA. EMBO J 2002;21:5733-5744.

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

AAA_23

AAA_21

Domain	Description	Evalue	Bits	GA	Start	End
AAA_15	AAA ATPase domain	1E-13	40	32.10	1	409
SMC_N	RecF/RecN/SMC N terminal domain	0	203	40.00	2	1180
AAA_23	AAA domain	1.3E-13	41	27.00	6	344
AAA_29	P-loop containing region of AAA domain	2.9E-05	13	27.00	25	49
ABC_tran	ABC transporter	0.0012	8	23.10	26	48
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	1.3E-08	24	27.00	27	51
SMC_hinge	SMC proteins Flexible Hinge Domain	3.9E-33	103	21.60	522	633
AAA_15	AAA ATPase domain	0.022	3	32.10	747	1160
AAA_23	AAA domain	0.17	1	27.00	926	1015
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	2.9E-11	33	27.00	1049	1160
ABC_tran	ABC transporter	0.001	9	23.10	1089	1116