c2pfam

AT3G01390.1 :

Domain Description Evalue Bits GA Start End
V-ATPase_G Vacuolar (H+)-ATPase G subunit 1.9E-36 115 22.90 7 109
Muted Organelle biogenesis, Muted-like protein 5.4E-05 14 26.00 9 63
Mod_r Modifier of rudimentary (Mod(r)) protein 9.9E-07 19 27.00 10 106
Apolipoprotein Apolipoprotein A1/A4/E domain 9.5E-06 15 90.00 11 109
ATP-synt_B ATP synthase B/B' CF(0) 0.00038 11 22.40 11 60
V-ATPase_G_2 Vacuolar (H+)-ATPase G subunit 0.00052 10 28.00 11 85
PMSI1 Protein missing in infertile sperm 1, putative 0.00063 9 25.00 11 97
RNase_Y_N RNase Y N-terminal region 0.00018 11 32.00 11 95
HrpE HrpE protein 8.3E-05 12 23.00 12 91
PEP-utilisers_N PEP-utilising enzyme, N-terminal 0.0085 6 21.20 17 58
DUF4407 Domain of unknown function (DUF4407) 0.00056 9 31.30 19 93
ZYG-11_interact Interactor of ZYG-11 0.00051 9 25.00 30 105
KH_2 KH domain 0.099 3 20.80 31 47
ATP-synt_B ATP synthase B/B' CF(0) 0.00024 11 22.40 36 102
KH_2 KH domain 0.00027 11 20.80 66 97
KH_1 KH domain 7.4E-05 13 20.20 66 90
Muted Organelle biogenesis, Muted-like protein 0.16 2 26.00 75 90

110

V-ATPase_G
Muted
Mod_r
Apolipoprotein
ATP-synt_B
V-ATPase_G_2
PMSI1
RNase_Y_N
HrpE
PEP-utilisers_N
DUF4407
ZYG-11_interact
KH_2
ATP-synt_B
KH_2
KH_1
Muted

References:

ATP-synt_B

ZYG-11_interact
17304241 The Caenorhabditis elegans cell-cycle regulator ZYG-11 defines a conserved family of CUL-2 complex components. EMBO Rep. 2007;8:279-286.

RNase_Y_N

PEP-utilisers_N

DUF4407

PMSI1

V-ATPase_G_2

V-ATPase_G
9872382 Structure, function and regulation of the vacuolar (H+)-ATPases. FEBS Lett 1998;440:258-263.
10748245 Structure, function and regulation of the plant vacuolar H(+)-translocating ATPase. Biochim Biophys Acta 2000;1465:17-36.

Apolipoprotein
2063194 Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E. Science 1991;252:1817-1822.

HrpE
7579617 The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs. Mol Plant Microbe Interact 1995;8:733-746.

KH_2
8036511 Conserved structures and diversity of functions of RNA-binding proteins. Science 1994;265:615-621.
8612276 Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. Cell 1996;85:237-245.

KH_1
8036511 Conserved structures and diversity of functions of RNA-binding proteins. Science 1994;265:615-621.
8612276 Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. Cell 1996;85:237-245.

Mod_r
7651329 Modifier of rudimentary p1, mod(r)p1, a trans-acting regulatory mutation of rudimentary. Mol Gen Genet 1995;248:69-78.
15240819 The growth-regulatory protein HCRP1/hVps37A is a subunit of mammalian ESCRT-I and mediates receptor down-regulation. Mol Biol Cell 2004;15:4337-4346.

Muted

Domain	Description	Evalue	Bits	GA	Start	End
V-ATPase_G	Vacuolar (H+)-ATPase G subunit	1.9E-36	115	22.90	7	109
Muted	Organelle biogenesis, Muted-like protein	5.4E-05	14	26.00	9	63
Mod_r	Modifier of rudimentary (Mod(r)) protein	9.9E-07	19	27.00	10	106
Apolipoprotein	Apolipoprotein A1/A4/E domain	9.5E-06	15	90.00	11	109
ATP-synt_B	ATP synthase B/B' CF(0)	0.00038	11	22.40	11	60
V-ATPase_G_2	Vacuolar (H+)-ATPase G subunit	0.00052	10	28.00	11	85
PMSI1	Protein missing in infertile sperm 1, putative	0.00063	9	25.00	11	97
RNase_Y_N	RNase Y N-terminal region	0.00018	11	32.00	11	95
HrpE	HrpE protein	8.3E-05	12	23.00	12	91
PEP-utilisers_N	PEP-utilising enzyme, N-terminal	0.0085	6	21.20	17	58
DUF4407	Domain of unknown function (DUF4407)	0.00056	9	31.30	19	93
ZYG-11_interact	Interactor of ZYG-11	0.00051	9	25.00	30	105
KH_2	KH domain	0.099	3	20.80	31	47
ATP-synt_B	ATP synthase B/B' CF(0)	0.00024	11	22.40	36	102
KH_2	KH domain	0.00027	11	20.80	66	97
KH_1	KH domain	7.4E-05	13	20.20	66	90
Muted	Organelle biogenesis, Muted-like protein	0.16	2	26.00	75	90