c2pfam

AT3G01830.1 :

Domain Description Evalue Bits GA Start End
EF-hand_7 EF-hand domain pair 7.2E-06 16 30.00 4 29
DUF4196 Domain of unknown function (DUF4196) 0.13 2 25.00 9 54
EF-hand_8 EF-hand domain pair 0.0018 8 28.00 10 28
EF-hand_1 EF hand 0.00052 9 25.40 11 29
EF-hand_6 EF-hand domain 0.00023 11 25.00 12 35
EF-hand_5 EF hand 0.0044 6 25.90 14 29
EF-hand_9 EF-hand domain 0.0013 9 37.00 14 36
DUF4196 Domain of unknown function (DUF4196) 1.7E-05 14 25.00 49 136
EF-hand_6 EF-hand domain 0.61 0 25.00 62 75
Exonuc_VII_S Exonuclease VII small subunit 0.0015 8 20.80 63 80
EF-hand_1 EF hand 0.85 -1 25.40 66 75
MIT MIT (microtubule interacting and transport) domain 3.4E-06 17 28.30 73 97
Exonuc_VII_S Exonuclease VII small subunit 0.0071 6 20.80 84 97
EF-hand_7 EF-hand domain pair 4.4E-09 26 30.00 85 146
EF-hand_1 EF hand 0.35 0 25.40 86 94
EF-hand_6 EF-hand domain 0.038 4 25.00 87 112
EF-hand_8 EF-hand domain pair 6.8E-14 41 28.00 97 146
EF-hand_1 EF hand 2.4E-10 29 25.40 121 146
EF-hand_5 EF hand 2.8E-08 22 25.90 126 145
EF-hand_6 EF-hand domain 6.5E-06 15 25.00 127 146
EF-hand_9 EF-hand domain 0.054 3 37.00 131 145

146

EF-hand_7
DUF4196
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_9
DUF4196
EF-hand_6
Exonuc_VII_S
EF-hand_1
MIT
Exonuc_VII_S
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_9

References:

EF-hand_9

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

MIT
11085978 Identification and characterization of SNX15, a novel sorting nexin involved in protein trafficking. J Biol Chem 2001;276:5074-5084.
16193069 Structural and mechanistic studies of VPS4 proteins. EMBO J. 2005;24:3658-3669.
16174732 Structure and ESCRT-III protein interactions of the MIT domain of human VPS4A. Proc Natl Acad Sci U S A. 2005;102:13813-13818.

EF-hand_1

Exonuc_VII_S
6284744 Subunit structure of Escherichia coli exonuclease VII. J Biol Chem 1982;257:8799-8805.

DUF4196

Domain	Description	Evalue	Bits	GA	Start	End
EF-hand_7	EF-hand domain pair	7.2E-06	16	30.00	4	29
DUF4196	Domain of unknown function (DUF4196)	0.13	2	25.00	9	54
EF-hand_8	EF-hand domain pair	0.0018	8	28.00	10	28
EF-hand_1	EF hand	0.00052	9	25.40	11	29
EF-hand_6	EF-hand domain	0.00023	11	25.00	12	35
EF-hand_5	EF hand	0.0044	6	25.90	14	29
EF-hand_9	EF-hand domain	0.0013	9	37.00	14	36
DUF4196	Domain of unknown function (DUF4196)	1.7E-05	14	25.00	49	136
EF-hand_6	EF-hand domain	0.61	0	25.00	62	75
Exonuc_VII_S	Exonuclease VII small subunit	0.0015	8	20.80	63	80
EF-hand_1	EF hand	0.85	-1	25.40	66	75
MIT	MIT (microtubule interacting and transport) domain	3.4E-06	17	28.30	73	97
Exonuc_VII_S	Exonuclease VII small subunit	0.0071	6	20.80	84	97
EF-hand_7	EF-hand domain pair	4.4E-09	26	30.00	85	146
EF-hand_1	EF hand	0.35	0	25.40	86	94
EF-hand_6	EF-hand domain	0.038	4	25.00	87	112
EF-hand_8	EF-hand domain pair	6.8E-14	41	28.00	97	146
EF-hand_1	EF hand	2.4E-10	29	25.40	121	146
EF-hand_5	EF hand	2.8E-08	22	25.90	126	145
EF-hand_6	EF-hand domain	6.5E-06	15	25.00	127	146
EF-hand_9	EF-hand domain	0.054	3	37.00	131	145