c2pfam

AT3G05670.1 :

Domain Description Evalue Bits GA Start End
zf-rbx1 RING-H2 zinc finger domain 4E-08 23 31.00 408 455
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 8.3E-07 19 27.00 411 459
Baculo_IE-1 Baculovirus immediate-early protein (IE-0) 3E-06 17 25.30 411 464
zf-RING_2 Ring finger domain 1.6E-10 31 27.30 412 455
zf-RING_UBOX RING-type zinc-finger 7.6E-07 19 25.20 413 452
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 3.9E-07 20 21.00 413 454
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 7.5E-06 16 27.00 413 454
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.0003 11 21.40 413 460
Prok-RING_4 Prokaryotic RING finger family 4 2.8E-05 14 27.00 413 458
zf-RING_5 zinc-RING finger domain 1.9E-05 15 27.90 413 456
zf-P11 P-11 zinc finger 2.1E-05 14 24.90 426 456
Prok-RING_4 Prokaryotic RING finger family 4 0.0076 6 27.00 492 526
zf-RING_5 zinc-RING finger domain 0.82 0 27.90 504 524
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.036 4 21.40 505 550
PHD PHD-finger 9.2E-13 38 27.90 505 551
PHD_2 PHD-finger 5.3E-06 16 28.00 517 550
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 0.72 0 27.00 853 861

883

zf-rbx1
zf-C3HC4_3
Baculo_IE-1
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
Prok-RING_4
zf-RING_5
zf-P11
Prok-RING_4
zf-RING_5
zf-ANAPC11
PHD
PHD_2
zf-C3HC4_3

References:

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-C3HC4_2

Baculo_IE-1
9188574 A mechanism for negative gene regulation in Autographa californica multinucleocapsid nuclear polyhedrosis virus. J Virol 1997;71:5088-5094.

zf-ANAPC11

zf-RING_UBOX

zf-RING_5

zf-RING_2

zf-rbx1

zf-C3HC4_3

Prok-RING_4

zf-P11

PHD_2

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Domain	Description	Evalue	Bits	GA	Start	End
zf-rbx1	RING-H2 zinc finger domain	4E-08	23	31.00	408	455
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	8.3E-07	19	27.00	411	459
Baculo_IE-1	Baculovirus immediate-early protein (IE-0)	3E-06	17	25.30	411	464
zf-RING_2	Ring finger domain	1.6E-10	31	27.30	412	455
zf-RING_UBOX	RING-type zinc-finger	7.6E-07	19	25.20	413	452
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	3.9E-07	20	21.00	413	454
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	7.5E-06	16	27.00	413	454
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.0003	11	21.40	413	460
Prok-RING_4	Prokaryotic RING finger family 4	2.8E-05	14	27.00	413	458
zf-RING_5	zinc-RING finger domain	1.9E-05	15	27.90	413	456
zf-P11	P-11 zinc finger	2.1E-05	14	24.90	426	456
Prok-RING_4	Prokaryotic RING finger family 4	0.0076	6	27.00	492	526
zf-RING_5	zinc-RING finger domain	0.82	0	27.90	504	524
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.036	4	21.40	505	550
PHD	PHD-finger	9.2E-13	38	27.90	505	551
PHD_2	PHD-finger	5.3E-06	16	28.00	517	550
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	0.72	0	27.00	853	861