c2pfam

AT1G12820.1 :

Domain Description Evalue Bits GA Start End
F-box_5 F-box 4.5E-23 70 25.50 2 42
F-box-like F-box-like 3.6E-08 22 24.30 3 35
F-box F-box domain 2.7E-06 16 20.50 5 35
LRR_4 Leucine Rich repeats (2 copies) 0.94 -1 27.00 60 69
Transp_inhibit Transport inhibitor response 1 protein domain 5.7E-27 82 33.00 61 107
LRR_4 Leucine Rich repeats (2 copies) 0.31 1 27.00 102 137
LRR_8 Leucine rich repeat 0.63 -1 27.00 107 130
LRR_6 Leucine Rich repeat 0.041 3 23.40 126 147
Transp_inhibit Transport inhibitor response 1 protein domain 0.39 -1 33.00 143 158
LRR_8 Leucine rich repeat 0.00083 8 27.00 148 173
LRR_4 Leucine Rich repeats (2 copies) 0.0086 6 27.00 149 165
LRR_6 Leucine Rich repeat 1.8E-05 14 23.40 149 165
LRR_6 Leucine Rich repeat 0.27 1 23.40 177 188
LRR_4 Leucine Rich repeats (2 copies) 0.041 4 27.00 205 221
LRR_8 Leucine rich repeat 0.53 -1 27.00 206 215
LRR_8 Leucine rich repeat 0.34 0 27.00 283 293
LRR_6 Leucine Rich repeat 0.18 1 23.40 283 294
LRR_4 Leucine Rich repeats (2 copies) 0.021 4 27.00 284 318
F-box F-box domain 0.74 -1 20.50 302 316
F-box-like F-box-like 0.71 -1 24.30 325 337
LRR_4 Leucine Rich repeats (2 copies) 0.65 0 27.00 353 377
LRR_4 Leucine Rich repeats (2 copies) 0.23 1 27.00 430 446
LRR_6 Leucine Rich repeat 0.49 0 23.40 477 494
LRR_6 Leucine Rich repeat 0.21 1 23.40 504 524

577

F-box_5
F-box-like
F-box
LRR_4
Transp_inhibit
LRR_4
LRR_8
LRR_6
Transp_inhibit
LRR_8
LRR_4
LRR_6
LRR_6
LRR_4
LRR_8
LRR_8
LRR_6
LRR_4
F-box
F-box-like
LRR_4
LRR_4
LRR_6
LRR_6

References:

F-box_5

F-box-like

LRR_4

F-box
8706131 SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996;86:263-274.
9346238 F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex. Cell. 1997;91:209-219.

LRR_8

LRR_6

Transp_inhibit

Domain	Description	Evalue	Bits	GA	Start	End
F-box_5	F-box	4.5E-23	70	25.50	2	42
F-box-like	F-box-like	3.6E-08	22	24.30	3	35
F-box	F-box domain	2.7E-06	16	20.50	5	35
LRR_4	Leucine Rich repeats (2 copies)	0.94	-1	27.00	60	69
Transp_inhibit	Transport inhibitor response 1 protein domain	5.7E-27	82	33.00	61	107
LRR_4	Leucine Rich repeats (2 copies)	0.31	1	27.00	102	137
LRR_8	Leucine rich repeat	0.63	-1	27.00	107	130
LRR_6	Leucine Rich repeat	0.041	3	23.40	126	147
Transp_inhibit	Transport inhibitor response 1 protein domain	0.39	-1	33.00	143	158
LRR_8	Leucine rich repeat	0.00083	8	27.00	148	173
LRR_4	Leucine Rich repeats (2 copies)	0.0086	6	27.00	149	165
LRR_6	Leucine Rich repeat	1.8E-05	14	23.40	149	165
LRR_6	Leucine Rich repeat	0.27	1	23.40	177	188
LRR_4	Leucine Rich repeats (2 copies)	0.041	4	27.00	205	221
LRR_8	Leucine rich repeat	0.53	-1	27.00	206	215
LRR_8	Leucine rich repeat	0.34	0	27.00	283	293
LRR_6	Leucine Rich repeat	0.18	1	23.40	283	294
LRR_4	Leucine Rich repeats (2 copies)	0.021	4	27.00	284	318
F-box	F-box domain	0.74	-1	20.50	302	316
F-box-like	F-box-like	0.71	-1	24.30	325	337
LRR_4	Leucine Rich repeats (2 copies)	0.65	0	27.00	353	377
LRR_4	Leucine Rich repeats (2 copies)	0.23	1	27.00	430	446
LRR_6	Leucine Rich repeat	0.49	0	23.40	477	494
LRR_6	Leucine Rich repeat	0.21	1	23.40	504	524