c2pfam

AT3G07040.1 :

Domain Description Evalue Bits GA Start End
Rx_N Rx N-terminal domain 3.3E-17 53 27.70 8 94
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 1 -1 21.70 51 69
NB-ARC NB-ARC domain 0 278 23.50 177 425
AAA_16 AAA ATPase domain 1.2E-06 19 32.60 185 288
Zeta_toxin Zeta toxin 1.2E-06 18 20.10 192 287
TsaE Threonylcarbamoyl adenosine biosynthesis protein TsaE 5E-05 13 26.60 192 278
AAA_14 AAA domain 9.4E-05 12 27.00 194 288
AAA_22 AAA domain 9.1E-06 16 27.00 195 287
AAA_33 AAA domain 1E-06 19 27.00 195 286
AAA_18 AAA domain 0.00011 13 29.40 196 244
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 0.00027 11 21.70 196 216
LRR_8 Leucine rich repeat 3.3E-05 14 27.00 575 615
LRR_4 Leucine Rich repeats (2 copies) 2.1E-06 18 27.00 605 642
LRR_8 Leucine rich repeat 0.00015 11 27.00 620 655
RisS_PPD Periplasmic domain of Sensor histidine kinase RisS 0.00028 11 27.50 705 755
LRR_4 Leucine Rich repeats (2 copies) 0.0019 9 27.00 759 791
LRR_8 Leucine rich repeat 0.00083 9 27.00 772 808
LRR_8 Leucine rich repeat 0.18 2 27.00 852 882
LRR_4 Leucine Rich repeats (2 copies) 0.05 4 27.00 870 890

926

Rx_N
CbiA
NB-ARC
AAA_16
Zeta_toxin
TsaE
AAA_14
AAA_22
AAA_33
AAA_18
CbiA
LRR_8
LRR_4
LRR_8
RisS_PPD
LRR_4
LRR_8
LRR_8
LRR_4

References:

AAA_16

AAA_14

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

TsaE

Rx_N

Zeta_toxin
12571357 Crystal structure of the plasmid maintenance system epsilon/zeta: functional mechanism of toxin zeta and inactivation by epsilon 2 zeta 2 complex formation. Proc Natl Acad Sci U S A 2003;100:1661-1666.

LRR_8

LRR_4

CbiA
9742225 Cobalamin (vitamin B12) biosynthesis: identification and characterization of a Bacillus megaterium cobI operon. Biochem J 1998;335:159-166.
9742226 Cobalamin (vitamin B12) biosynthesis: functional characterization of the Bacillus megaterium cbi genes required to convert uroporphyrinogen III into cobyrinic acid a,c-diamide. Biochem J 1998;335:167-173.
7635831 Identification and sequence analysis of genes involved in late steps in cobalamin (vitamin B12) synthesis in Rhodobacter capsulatus. J Bacteriol 1995;177:4481-4487.
8501034 Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium. J Bacteriol 1993;175:3303-3316.
10966576 The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase. Proteins 2000;41:238-247.
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.

AAA_33

RisS_PPD

AAA_22

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
Rx_N	Rx N-terminal domain	3.3E-17	53	27.70	8	94
CbiA	CobQ/CobB/MinD/ParA nucleotide binding domain	1	-1	21.70	51	69
NB-ARC	NB-ARC domain	0	278	23.50	177	425
AAA_16	AAA ATPase domain	1.2E-06	19	32.60	185	288
Zeta_toxin	Zeta toxin	1.2E-06	18	20.10	192	287
TsaE	Threonylcarbamoyl adenosine biosynthesis protein TsaE	5E-05	13	26.60	192	278
AAA_14	AAA domain	9.4E-05	12	27.00	194	288
AAA_22	AAA domain	9.1E-06	16	27.00	195	287
AAA_33	AAA domain	1E-06	19	27.00	195	286
AAA_18	AAA domain	0.00011	13	29.40	196	244
CbiA	CobQ/CobB/MinD/ParA nucleotide binding domain	0.00027	11	21.70	196	216
LRR_8	Leucine rich repeat	3.3E-05	14	27.00	575	615
LRR_4	Leucine Rich repeats (2 copies)	2.1E-06	18	27.00	605	642
LRR_8	Leucine rich repeat	0.00015	11	27.00	620	655
RisS_PPD	Periplasmic domain of Sensor histidine kinase RisS	0.00028	11	27.50	705	755
LRR_4	Leucine Rich repeats (2 copies)	0.0019	9	27.00	759	791
LRR_8	Leucine rich repeat	0.00083	9	27.00	772	808
LRR_8	Leucine rich repeat	0.18	2	27.00	852	882
LRR_4	Leucine Rich repeats (2 copies)	0.05	4	27.00	870	890