c2pfam

AT3G07200.1 :

Domain Description Evalue Bits GA Start End
Rtf2 Replication termination factor 2 0.16 2 27.40 52 104
Rtf2 Replication termination factor 2 4E-05 13 27.40 121 176
zf-RING_4 RING/Ubox like zinc-binding domain 0.88 0 27.00 122 131
zf-Nse Zinc-finger of the MIZ type in Nse subunit 1.7E-05 15 20.70 124 164
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 1.6E-05 15 21.40 126 171
zinc-ribbons_6 zinc-ribbons 6.7E-05 13 25.00 126 170
Prok-RING_4 Prokaryotic RING finger family 4 0.55 1 27.00 126 131
zf-RING_2 Ring finger domain 3.5E-12 37 27.30 126 165
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.4E-10 31 27.00 126 169
FYVE FYVE zinc finger 0.023 5 26.80 126 158
zf-RING_11 RING-like zinc finger 0.00095 9 27.00 127 151
zf-RING_UBOX RING-type zinc-finger 1.7E-10 31 25.20 127 162
zf-C3HC4_4 zinc finger of C3HC4-type, RING 1.6E-07 22 30.00 127 164
zf-rbx1 RING-H2 zinc finger domain 2.7E-06 18 31.00 127 165
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2.1E-11 34 27.00 127 164
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 5.9E-11 33 21.00 127 164
zf-RING_5 zinc-RING finger domain 1.2E-10 32 27.90 127 166
Prok-RING_4 Prokaryotic RING finger family 4 1.5E-05 15 27.00 127 170
zf-RING_10 zinc RING finger of MSL2 9.5E-06 16 31.00 135 166
zf-RING_4 RING/Ubox like zinc-binding domain 7.4E-07 19 27.00 141 167
zf-RING_6 zf-RING of BARD1-type protein 0.00021 12 35.00 141 172

182

Rtf2
Rtf2
zf-RING_4
zf-Nse
zf-ANAPC11
zinc-ribbons_6
Prok-RING_4
zf-RING_2
zf-C3HC4_3
FYVE
zf-RING_11
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
Prok-RING_4
zf-RING_10
zf-RING_4
zf-RING_6

References:

zf-RING_10

Rtf2
19416828 Schizosaccharomyces pombe Rtf2 mediates site-specific replication termination by inhibiting replication restart. Proc Natl Acad Sci U S A. 2009;106:7927-7932.

zf-C3HC4_2

FYVE
8798641 Endosomal localization of the autoantigen EEA1 is mediated by a zinc-binding FYVE finger. J Biol Chem 1996;271:24048-24054.
9697764 FYVE fingers bind PtdIns(3)P. Nature 1998;394:432-433.
10564636 FYVE-finger proteins - effectors of an inositol lipid. J Cell Sci 1999;112:4175-4183.

zf-ANAPC11

zf-RING_UBOX

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-RING_6

zf-RING_5

zf-RING_4

zf-RING_2

zf-rbx1

zinc-ribbons_6

zf-RING_11

zf-C3HC4_4

zf-C3HC4_3

Prok-RING_4

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

Domain	Description	Evalue	Bits	GA	Start	End
Rtf2	Replication termination factor 2	0.16	2	27.40	52	104
Rtf2	Replication termination factor 2	4E-05	13	27.40	121	176
zf-RING_4	RING/Ubox like zinc-binding domain	0.88	0	27.00	122	131
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	1.7E-05	15	20.70	124	164
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	1.6E-05	15	21.40	126	171
zinc-ribbons_6	zinc-ribbons	6.7E-05	13	25.00	126	170
Prok-RING_4	Prokaryotic RING finger family 4	0.55	1	27.00	126	131
zf-RING_2	Ring finger domain	3.5E-12	37	27.30	126	165
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	1.4E-10	31	27.00	126	169
FYVE	FYVE zinc finger	0.023	5	26.80	126	158
zf-RING_11	RING-like zinc finger	0.00095	9	27.00	127	151
zf-RING_UBOX	RING-type zinc-finger	1.7E-10	31	25.20	127	162
zf-C3HC4_4	zinc finger of C3HC4-type, RING	1.6E-07	22	30.00	127	164
zf-rbx1	RING-H2 zinc finger domain	2.7E-06	18	31.00	127	165
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	2.1E-11	34	27.00	127	164
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	5.9E-11	33	21.00	127	164
zf-RING_5	zinc-RING finger domain	1.2E-10	32	27.90	127	166
Prok-RING_4	Prokaryotic RING finger family 4	1.5E-05	15	27.00	127	170
zf-RING_10	zinc RING finger of MSL2	9.5E-06	16	31.00	135	166
zf-RING_4	RING/Ubox like zinc-binding domain	7.4E-07	19	27.00	141	167
zf-RING_6	zf-RING of BARD1-type protein	0.00021	12	35.00	141	172