c2pfam

AT3G09740.1 :

Domain Description Evalue Bits GA Start End
DUF848 Gammaherpesvirus protein of unknown function (DUF848) 8E-06 16 22.30 24 131
Ran-binding RanGTP-binding protein 0.052 2 25.00 42 88
DUF2203 Uncharacterized conserved protein (DUF2203) 0.0045 8 20.80 43 98
Uso1_p115_C Uso1 / p115 like vesicle tethering protein, C terminal region 0.02 5 22.20 48 96
Latarcin Latarcin precursor 0.016 5 25.00 51 90
Spc7 Spc7 kinetochore protein 0.0081 5 34.00 52 108
APG17 Autophagy protein Apg17 0.16 1 25.00 55 93
DivIC Septum formation initiator 0.019 5 24.00 57 88
ApoLp-III Apolipophorin-III precursor (apoLp-III) 0.081 3 31.00 65 89
Ran-binding RanGTP-binding protein 6.5E-05 12 25.00 157 232
DUF5089 Domain of unknown function (DUF5089) 2.4E-05 14 36.10 161 233
Uso1_p115_C Uso1 / p115 like vesicle tethering protein, C terminal region 0.00052 10 22.20 161 230
APG17 Autophagy protein Apg17 5.5E-05 12 25.00 165 241
Spc7 Spc7 kinetochore protein 0.002 7 34.00 165 243
DUF4559 Domain of unknown function (DUF4559) 0.00014 11 27.00 171 231
DUF848 Gammaherpesvirus protein of unknown function (DUF848) 0.036 4 22.30 188 239
ApoLp-III Apolipophorin-III precursor (apoLp-III) 0.00094 9 31.00 190 240
DUF2203 Uncharacterized conserved protein (DUF2203) 0.077 4 20.80 201 234
SNARE SNARE domain 8.6E-16 48 30.00 209 258
Latarcin Latarcin precursor 0.019 5 25.00 210 244
DivIC Septum formation initiator 0.012 5 24.00 219 242

266

DUF848
Ran-binding
DUF2203
Uso1_p115_C
Latarcin
Spc7
APG17
DivIC
ApoLp-III
Ran-binding
DUF5089
Uso1_p115_C
APG17
Spc7
DUF4559
DUF848
ApoLp-III
DUF2203
SNARE
Latarcin
DivIC

References:

Ran-binding
12578832 Identification and characterization of a novel RanGTP-binding protein in the yeast Saccharomyces cerevisiae. J Biol Chem 2003;0:0-0.

APG17

Latarcin
16735513 Latarcins, antimicrobial and cytolytic peptides from the venom of the spider Lachesana tarabaevi (Zodariidae) that exemplify biomolecular diversity. J Biol Chem. 2006;281:20983-20992.

DivIC
8113187 Characterization of a cell division gene from Bacillus subtilis that is required for vegetative and sporulation septum formation. J Bacteriol 1994;176:1451-1459.

SNARE
9096343 A conserved domain is present in different families of vesicular fusion proteins: a new superfamily. Proc Natl Acad Sci U S A 1997;94:3046-3051.

DUF5089

ApoLp-III
11818551 Structural basis for the conformational adaptability of apolipophorin III, a helix-bundle exchangeable apolipoprotein. Proc Natl Acad Sci U S A 2002;99:1188-1193.

DUF4559

DUF848

DUF2203

Uso1_p115_C
11927603 Sequential tethering of Golgins and catalysis of SNAREpin assembly by the vesicle-tethering protein p115. J Cell Biol 2002;157:45-62.
12077354 Vesicle tethering complexes in membrane traffic. J Cell Sci 2002;115:2627-2637.

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

Domain	Description	Evalue	Bits	GA	Start	End
DUF848	Gammaherpesvirus protein of unknown function (DUF848)	8E-06	16	22.30	24	131
Ran-binding	RanGTP-binding protein	0.052	2	25.00	42	88
DUF2203	Uncharacterized conserved protein (DUF2203)	0.0045	8	20.80	43	98
Uso1_p115_C	Uso1 / p115 like vesicle tethering protein, C terminal region	0.02	5	22.20	48	96
Latarcin	Latarcin precursor	0.016	5	25.00	51	90
Spc7	Spc7 kinetochore protein	0.0081	5	34.00	52	108
APG17	Autophagy protein Apg17	0.16	1	25.00	55	93
DivIC	Septum formation initiator	0.019	5	24.00	57	88
ApoLp-III	Apolipophorin-III precursor (apoLp-III)	0.081	3	31.00	65	89
Ran-binding	RanGTP-binding protein	6.5E-05	12	25.00	157	232
DUF5089	Domain of unknown function (DUF5089)	2.4E-05	14	36.10	161	233
Uso1_p115_C	Uso1 / p115 like vesicle tethering protein, C terminal region	0.00052	10	22.20	161	230
APG17	Autophagy protein Apg17	5.5E-05	12	25.00	165	241
Spc7	Spc7 kinetochore protein	0.002	7	34.00	165	243
DUF4559	Domain of unknown function (DUF4559)	0.00014	11	27.00	171	231
DUF848	Gammaherpesvirus protein of unknown function (DUF848)	0.036	4	22.30	188	239
ApoLp-III	Apolipophorin-III precursor (apoLp-III)	0.00094	9	31.00	190	240
DUF2203	Uncharacterized conserved protein (DUF2203)	0.077	4	20.80	201	234
SNARE	SNARE domain	8.6E-16	48	30.00	209	258
Latarcin	Latarcin precursor	0.019	5	25.00	210	244
DivIC	Septum formation initiator	0.012	5	24.00	219	242