c2pfam

AT3G13380.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 4.2E-11 33 20.70 33 73
LRR_8 Leucine rich repeat 0.0011 8 27.00 81 113
LRR_4 Leucine Rich repeats (2 copies) 0.0045 7 27.00 81 113
LRR_8 Leucine rich repeat 6.3E-07 19 27.00 101 162
LRR_6 Leucine Rich repeat 0.078 3 23.40 101 114
LRR_2 Leucine Rich Repeat 0.021 5 20.90 102 118
LRR_1 Leucine Rich Repeat 0.0038 8 20.60 102 124
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00086 9 27.70 113 160
LRR_6 Leucine Rich repeat 0.00064 10 23.40 124 139
LRR_1 Leucine Rich Repeat 0.0056 7 20.60 125 138
LRR_4 Leucine Rich repeats (2 copies) 2.4E-06 18 27.00 125 162
RGCC Response gene to complement 32 protein family 0.00025 11 27.00 132 203
LRR_6 Leucine Rich repeat 0.1 3 23.40 149 163
LRR_6 Leucine Rich repeat 0.0024 8 23.40 173 190
LRR_4 Leucine Rich repeats (2 copies) 1.6E-07 21 27.00 176 213
LRR_8 Leucine rich repeat 2.4E-08 23 27.00 176 238
LRR_1 Leucine Rich Repeat 0.053 4 20.60 178 195
LRR_2 Leucine Rich Repeat 0.78 0 20.90 180 196
LRR_6 Leucine Rich repeat 0.00021 11 23.40 201 215
LRR_2 Leucine Rich Repeat 0.22 2 20.90 202 217
LRR_1 Leucine Rich Repeat 0.0023 9 20.60 202 218
LRR_8 Leucine rich repeat 2.2E-08 23 27.00 202 263
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.066 3 27.70 216 261
LRR_6 Leucine Rich repeat 0.45 1 23.40 225 240
LRR_4 Leucine Rich repeats (2 copies) 2E-07 21 27.00 227 268
LRR_1 Leucine Rich Repeat 0.55 1 20.60 227 250
LRR_6 Leucine Rich repeat 0.054 4 23.40 250 265
LRR_1 Leucine Rich Repeat 0.0017 9 20.60 253 269
LRR_4 Leucine Rich repeats (2 copies) 2E-06 18 27.00 253 293
LRR_6 Leucine Rich repeat 0.91 0 23.40 277 287
LRR_8 Leucine rich repeat 1.2E-10 31 27.00 278 338
LRR_6 Leucine Rich repeat 0.00064 10 23.40 301 316
LRR_4 Leucine Rich repeats (2 copies) 2.5E-07 21 27.00 304 338
LRR_1 Leucine Rich Repeat 4.6E-05 14 20.60 304 325
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.007 6 27.70 320 385
LRR_6 Leucine Rich repeat 0.033 4 23.40 327 340
LRR_1 Leucine Rich Repeat 0.041 5 20.60 327 340
LRR_8 Leucine rich repeat 5.3E-08 22 27.00 352 400
LRR_4 Leucine Rich repeats (2 copies) 4.7E-07 20 27.00 353 387
LRR_6 Leucine Rich repeat 0.0002 11 23.40 373 390
LRR_2 Leucine Rich Repeat 0.032 5 20.90 376 390
LRR_1 Leucine Rich Repeat 0.00011 13 20.60 376 398
LRR_4 Leucine Rich repeats (2 copies) 7.9E-07 19 27.00 404 441
LRR_8 Leucine rich repeat 6.6E-10 28 27.00 404 462
LRR_6 Leucine Rich repeat 0.0041 7 23.40 424 440
LRR_1 Leucine Rich Repeat 0.0056 7 20.60 427 446
LRR_4 Leucine Rich repeats (2 copies) 0.76 0 27.00 437 462
LRR_8 Leucine rich repeat 2.5E-06 17 27.00 458 511
LRR_8 Leucine rich repeat 5.9E-08 22 27.00 476 535
LRR_4 Leucine Rich repeats (2 copies) 0.0003 11 27.00 476 511
LRR_1 Leucine Rich Repeat 0.0019 9 20.60 476 498
LRR_4 Leucine Rich repeats (2 copies) 0.0033 8 27.00 504 539
LRR_8 Leucine rich repeat 1.9E-06 17 27.00 505 559
LRR_8 Leucine rich repeat 2.3E-06 17 27.00 524 568
LRR_4 Leucine Rich repeats (2 copies) 0.00095 9 27.00 524 562
LRR_1 Leucine Rich Repeat 0.19 3 20.60 525 546
LRR_1 Leucine Rich Repeat 0.054 4 20.60 548 565
LRR_8 Leucine rich repeat 0.012 5 27.00 634 652
LRR_6 Leucine Rich repeat 0.13 2 23.40 641 653
LRR_4 Leucine Rich repeats (2 copies) 0.00013 12 27.00 642 679
LRR_4 Leucine Rich repeats (2 copies) 4.2E-07 20 27.00 665 701
LRR_8 Leucine rich repeat 2.6E-14 42 27.00 665 723
LRR_1 Leucine Rich Repeat 0.00019 12 20.60 665 686
LRR_6 Leucine Rich repeat 0.091 3 23.40 665 677
LRR_1 Leucine Rich Repeat 0.0066 7 20.60 691 710
LRR_4 Leucine Rich repeats (2 copies) 3.9E-05 14 27.00 691 725
LRR_6 Leucine Rich repeat 0.062 3 23.40 692 700
LRR_6 Leucine Rich repeat 0.075 3 23.40 712 725
LRR_1 Leucine Rich Repeat 0.23 2 20.60 715 728
Pkinase Protein kinase domain 0 153 20.40 860 1129
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 145 23.10 861 1130
ABC1 ABC1 family 0.00028 11 20.60 863 886

1164

LRRNT_2
LRR_8
LRR_4
LRR_8
LRR_6
LRR_2
LRR_1
LRR_5
LRR_6
LRR_1
LRR_4
RGCC
LRR_6
LRR_6
LRR_4
LRR_8
LRR_1
LRR_2
LRR_6
LRR_2
LRR_1
LRR_8
LRR_5
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
LRR_4
LRR_6
LRR_8
LRR_6
LRR_4
LRR_1
LRR_5
LRR_6
LRR_1
LRR_8
LRR_4
LRR_6
LRR_2
LRR_1
LRR_4
LRR_8
LRR_6
LRR_1
LRR_4
LRR_8
LRR_8
LRR_4
LRR_1
LRR_4
LRR_8
LRR_8
LRR_4
LRR_1
LRR_1
LRR_8
LRR_6
LRR_4
LRR_4
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_6
LRR_6
LRR_1
Pkinase
PK_Tyr_Ser-Thr
ABC1

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

PK_Tyr_Ser-Thr

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_5

LRR_4

RGCC

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	4.2E-11	33	20.70	33	73
LRR_8	Leucine rich repeat	0.0011	8	27.00	81	113
LRR_4	Leucine Rich repeats (2 copies)	0.0045	7	27.00	81	113
LRR_8	Leucine rich repeat	6.3E-07	19	27.00	101	162
LRR_6	Leucine Rich repeat	0.078	3	23.40	101	114
LRR_2	Leucine Rich Repeat	0.021	5	20.90	102	118
LRR_1	Leucine Rich Repeat	0.0038	8	20.60	102	124
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00086	9	27.70	113	160
LRR_6	Leucine Rich repeat	0.00064	10	23.40	124	139
LRR_1	Leucine Rich Repeat	0.0056	7	20.60	125	138
LRR_4	Leucine Rich repeats (2 copies)	2.4E-06	18	27.00	125	162
RGCC	Response gene to complement 32 protein family	0.00025	11	27.00	132	203
LRR_6	Leucine Rich repeat	0.1	3	23.40	149	163
LRR_6	Leucine Rich repeat	0.0024	8	23.40	173	190
LRR_4	Leucine Rich repeats (2 copies)	1.6E-07	21	27.00	176	213
LRR_8	Leucine rich repeat	2.4E-08	23	27.00	176	238
LRR_1	Leucine Rich Repeat	0.053	4	20.60	178	195
LRR_2	Leucine Rich Repeat	0.78	0	20.90	180	196
LRR_6	Leucine Rich repeat	0.00021	11	23.40	201	215
LRR_2	Leucine Rich Repeat	0.22	2	20.90	202	217
LRR_1	Leucine Rich Repeat	0.0023	9	20.60	202	218
LRR_8	Leucine rich repeat	2.2E-08	23	27.00	202	263
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.066	3	27.70	216	261
LRR_6	Leucine Rich repeat	0.45	1	23.40	225	240
LRR_4	Leucine Rich repeats (2 copies)	2E-07	21	27.00	227	268
LRR_1	Leucine Rich Repeat	0.55	1	20.60	227	250
LRR_6	Leucine Rich repeat	0.054	4	23.40	250	265
LRR_1	Leucine Rich Repeat	0.0017	9	20.60	253	269
LRR_4	Leucine Rich repeats (2 copies)	2E-06	18	27.00	253	293
LRR_6	Leucine Rich repeat	0.91	0	23.40	277	287
LRR_8	Leucine rich repeat	1.2E-10	31	27.00	278	338
LRR_6	Leucine Rich repeat	0.00064	10	23.40	301	316
LRR_4	Leucine Rich repeats (2 copies)	2.5E-07	21	27.00	304	338
LRR_1	Leucine Rich Repeat	4.6E-05	14	20.60	304	325
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.007	6	27.70	320	385
LRR_6	Leucine Rich repeat	0.033	4	23.40	327	340
LRR_1	Leucine Rich Repeat	0.041	5	20.60	327	340
LRR_8	Leucine rich repeat	5.3E-08	22	27.00	352	400
LRR_4	Leucine Rich repeats (2 copies)	4.7E-07	20	27.00	353	387
LRR_6	Leucine Rich repeat	0.0002	11	23.40	373	390
LRR_2	Leucine Rich Repeat	0.032	5	20.90	376	390
LRR_1	Leucine Rich Repeat	0.00011	13	20.60	376	398
LRR_4	Leucine Rich repeats (2 copies)	7.9E-07	19	27.00	404	441
LRR_8	Leucine rich repeat	6.6E-10	28	27.00	404	462
LRR_6	Leucine Rich repeat	0.0041	7	23.40	424	440
LRR_1	Leucine Rich Repeat	0.0056	7	20.60	427	446
LRR_4	Leucine Rich repeats (2 copies)	0.76	0	27.00	437	462
LRR_8	Leucine rich repeat	2.5E-06	17	27.00	458	511
LRR_8	Leucine rich repeat	5.9E-08	22	27.00	476	535
LRR_4	Leucine Rich repeats (2 copies)	0.0003	11	27.00	476	511
LRR_1	Leucine Rich Repeat	0.0019	9	20.60	476	498
LRR_4	Leucine Rich repeats (2 copies)	0.0033	8	27.00	504	539
LRR_8	Leucine rich repeat	1.9E-06	17	27.00	505	559
LRR_8	Leucine rich repeat	2.3E-06	17	27.00	524	568
LRR_4	Leucine Rich repeats (2 copies)	0.00095	9	27.00	524	562
LRR_1	Leucine Rich Repeat	0.19	3	20.60	525	546
LRR_1	Leucine Rich Repeat	0.054	4	20.60	548	565
LRR_8	Leucine rich repeat	0.012	5	27.00	634	652
LRR_6	Leucine Rich repeat	0.13	2	23.40	641	653
LRR_4	Leucine Rich repeats (2 copies)	0.00013	12	27.00	642	679
LRR_4	Leucine Rich repeats (2 copies)	4.2E-07	20	27.00	665	701
LRR_8	Leucine rich repeat	2.6E-14	42	27.00	665	723
LRR_1	Leucine Rich Repeat	0.00019	12	20.60	665	686
LRR_6	Leucine Rich repeat	0.091	3	23.40	665	677
LRR_1	Leucine Rich Repeat	0.0066	7	20.60	691	710
LRR_4	Leucine Rich repeats (2 copies)	3.9E-05	14	27.00	691	725
LRR_6	Leucine Rich repeat	0.062	3	23.40	692	700
LRR_6	Leucine Rich repeat	0.075	3	23.40	712	725
LRR_1	Leucine Rich Repeat	0.23	2	20.60	715	728
Pkinase	Protein kinase domain	0	153	20.40	860	1129
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	145	23.10	861	1130
ABC1	ABC1 family	0.00028	11	20.60	863	886