c2pfam

AT3G14330.1 :

Domain Description Evalue Bits GA Start End
PPR_long Pentacotripeptide-repeat region of PRORP 0.33 -1 27.00 106 149
PPR_1 PPR repeat 0.71 -1 23.80 107 118
PPR_3 Pentatricopeptide repeat domain 0.029 4 25.00 134 153
PPR_3 Pentatricopeptide repeat domain 0.29 0 25.00 172 193
PPR PPR repeat 0.052 3 25.00 173 193
PPR_2 PPR repeat family 0.73 -1 30.00 173 193
TPR_14 Tetratricopeptide repeat 0.024 5 23.50 203 224
PPR PPR repeat 0.0002 11 25.00 204 228
PPR_2 PPR repeat family 5.7E-05 12 30.00 210 247
PPR_long Pentacotripeptide-repeat region of PRORP 2.9E-05 12 27.00 239 389
PPR_3 Pentatricopeptide repeat domain 1.3E-06 17 25.00 268 312
PPR_1 PPR repeat 3.7E-05 13 23.80 269 297
PPR_2 PPR repeat family 1.8E-08 24 30.00 270 302
PPR PPR repeat 5.2E-08 22 25.00 272 302
TPR_14 Tetratricopeptide repeat 0.027 5 23.50 277 295
PPR_1 PPR repeat 2.5E-07 19 23.80 300 329
PPR_2 PPR repeat family 1.6E-11 33 30.00 300 348
PPR PPR repeat 6.3E-09 25 25.00 303 331
PPR_3 Pentatricopeptide repeat domain 7E-05 12 25.00 324 384
PPR_1 PPR repeat 8.6E-05 11 23.80 369 398
PPR_2 PPR repeat family 0.00071 9 30.00 370 401
PPR PPR repeat 6.7E-06 15 25.00 376 401
PPR_2 PPR repeat family 2.3E-14 42 30.00 402 448
PPR_1 PPR repeat 0.0018 7 23.80 402 429
PPR_3 Pentatricopeptide repeat domain 6.1E-06 15 25.00 402 449
PPR PPR repeat 4.9E-09 25 25.00 405 434
TPR_14 Tetratricopeptide repeat 0.17 2 23.50 410 433
PPR_long Pentacotripeptide-repeat region of PRORP 1.3E-06 17 27.00 418 500
PPR_3 Pentatricopeptide repeat domain 5.6E-07 19 25.00 425 485
PPR_1 PPR repeat 0.0068 5 23.80 433 465
PPR PPR repeat 4.2E-06 16 25.00 439 466
PPR_1 PPR repeat 5.9E-06 15 23.80 476 500
TPR_14 Tetratricopeptide repeat 0.12 3 23.50 477 498
PPR PPR repeat 9.5E-05 12 25.00 477 500
PPR_2 PPR repeat family 0.00087 9 30.00 477 502
PPR PPR repeat 0.31 1 25.00 508 522
PPR PPR repeat 0.0073 6 25.00 548 571
PPR_2 PPR repeat family 0.16 1 30.00 549 572
DYW_deaminase DYW family of nucleic acid deaminases 1E-35 111 31.60 576 699

710

PPR_long
PPR_1
PPR_3
PPR_3
PPR
PPR_2
TPR_14
PPR
PPR_2
PPR_long
PPR_3
PPR_1
PPR_2
PPR
TPR_14
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_2
PPR_1
PPR_3
PPR
TPR_14
PPR_long
PPR_3
PPR_1
PPR
PPR_1
TPR_14
PPR
PPR_2
PPR
PPR
PPR_2
DYW_deaminase

References:

DYW_deaminase

TPR_14

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
PPR_long	Pentacotripeptide-repeat region of PRORP	0.33	-1	27.00	106	149
PPR_1	PPR repeat	0.71	-1	23.80	107	118
PPR_3	Pentatricopeptide repeat domain	0.029	4	25.00	134	153
PPR_3	Pentatricopeptide repeat domain	0.29	0	25.00	172	193
PPR	PPR repeat	0.052	3	25.00	173	193
PPR_2	PPR repeat family	0.73	-1	30.00	173	193
TPR_14	Tetratricopeptide repeat	0.024	5	23.50	203	224
PPR	PPR repeat	0.0002	11	25.00	204	228
PPR_2	PPR repeat family	5.7E-05	12	30.00	210	247
PPR_long	Pentacotripeptide-repeat region of PRORP	2.9E-05	12	27.00	239	389
PPR_3	Pentatricopeptide repeat domain	1.3E-06	17	25.00	268	312
PPR_1	PPR repeat	3.7E-05	13	23.80	269	297
PPR_2	PPR repeat family	1.8E-08	24	30.00	270	302
PPR	PPR repeat	5.2E-08	22	25.00	272	302
TPR_14	Tetratricopeptide repeat	0.027	5	23.50	277	295
PPR_1	PPR repeat	2.5E-07	19	23.80	300	329
PPR_2	PPR repeat family	1.6E-11	33	30.00	300	348
PPR	PPR repeat	6.3E-09	25	25.00	303	331
PPR_3	Pentatricopeptide repeat domain	7E-05	12	25.00	324	384
PPR_1	PPR repeat	8.6E-05	11	23.80	369	398
PPR_2	PPR repeat family	0.00071	9	30.00	370	401
PPR	PPR repeat	6.7E-06	15	25.00	376	401
PPR_2	PPR repeat family	2.3E-14	42	30.00	402	448
PPR_1	PPR repeat	0.0018	7	23.80	402	429
PPR_3	Pentatricopeptide repeat domain	6.1E-06	15	25.00	402	449
PPR	PPR repeat	4.9E-09	25	25.00	405	434
TPR_14	Tetratricopeptide repeat	0.17	2	23.50	410	433
PPR_long	Pentacotripeptide-repeat region of PRORP	1.3E-06	17	27.00	418	500
PPR_3	Pentatricopeptide repeat domain	5.6E-07	19	25.00	425	485
PPR_1	PPR repeat	0.0068	5	23.80	433	465
PPR	PPR repeat	4.2E-06	16	25.00	439	466
PPR_1	PPR repeat	5.9E-06	15	23.80	476	500
TPR_14	Tetratricopeptide repeat	0.12	3	23.50	477	498
PPR	PPR repeat	9.5E-05	12	25.00	477	500
PPR_2	PPR repeat family	0.00087	9	30.00	477	502
PPR	PPR repeat	0.31	1	25.00	508	522
PPR	PPR repeat	0.0073	6	25.00	548	571
PPR_2	PPR repeat family	0.16	1	30.00	549	572
DYW_deaminase	DYW family of nucleic acid deaminases	1E-35	111	31.60	576	699