c2pfam

AT3G14350.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.5E-11 34 20.70 29 69
LRR_8 Leucine rich repeat 0.099 2 27.00 91 107
LRR_6 Leucine Rich repeat 0.013 6 23.40 94 110
LRR_4 Leucine Rich repeats (2 copies) 4.9E-06 17 27.00 95 129
LRR_1 Leucine Rich Repeat 0.67 1 20.60 98 111
FNIP FNIP Repeat 0.022 5 20.90 114 129
LRR_6 Leucine Rich repeat 0.01 6 23.40 117 131
LRR_8 Leucine rich repeat 3.1E-13 39 27.00 117 175
LRR_1 Leucine Rich Repeat 0.012 6 20.60 118 130
LRR_1 Leucine Rich Repeat 0.03 5 20.60 143 156
LRR_6 Leucine Rich repeat 0.014 6 23.40 143 153
LRR_4 Leucine Rich repeats (2 copies) 1.6E-08 25 27.00 143 181
LRR_8 Leucine rich repeat 3E-07 20 27.00 160 200
LRR_6 Leucine Rich repeat 0.014 6 23.40 163 178
LRR_1 Leucine Rich Repeat 0.0091 7 20.60 166 187
FNIP FNIP Repeat 0.094 3 20.90 177 187
LRR_4 Leucine Rich repeats (2 copies) 0.0062 7 27.00 192 223
LRR_4 Leucine Rich repeats (2 copies) 0.073 4 27.00 212 235
LRR_8 Leucine rich repeat 0.033 4 27.00 212 232
LRR_1 Leucine Rich Repeat 0.0087 7 20.60 212 232
FNIP FNIP Repeat 0.14 2 20.90 224 237
DUF4690 Small Novel Rich in Cartilage 0.00025 11 30.70 237 310
SARAF SOCE-associated regulatory factor of calcium homoeostasis 7.1E-05 12 30.80 243 328
PRIMA1 Proline-rich membrane anchor 1 0.00016 11 27.60 247 318
VSP Giardia variant-specific surface protein 7.3E-05 11 30.00 277 311
Pkinase Protein kinase domain 0 131 20.40 420 688
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 136 23.10 421 690

717

LRRNT_2
LRR_8
LRR_6
LRR_4
LRR_1
FNIP
LRR_6
LRR_8
LRR_1
LRR_1
LRR_6
LRR_4
LRR_8
LRR_6
LRR_1
FNIP
LRR_4
LRR_4
LRR_8
LRR_1
FNIP
DUF4690
SARAF
PRIMA1
VSP
Pkinase
PK_Tyr_Ser-Thr

References:

PRIMA1

FNIP

LRR_8

SARAF

DUF4690

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

VSP

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.5E-11	34	20.70	29	69
LRR_8	Leucine rich repeat	0.099	2	27.00	91	107
LRR_6	Leucine Rich repeat	0.013	6	23.40	94	110
LRR_4	Leucine Rich repeats (2 copies)	4.9E-06	17	27.00	95	129
LRR_1	Leucine Rich Repeat	0.67	1	20.60	98	111
FNIP	FNIP Repeat	0.022	5	20.90	114	129
LRR_6	Leucine Rich repeat	0.01	6	23.40	117	131
LRR_8	Leucine rich repeat	3.1E-13	39	27.00	117	175
LRR_1	Leucine Rich Repeat	0.012	6	20.60	118	130
LRR_1	Leucine Rich Repeat	0.03	5	20.60	143	156
LRR_6	Leucine Rich repeat	0.014	6	23.40	143	153
LRR_4	Leucine Rich repeats (2 copies)	1.6E-08	25	27.00	143	181
LRR_8	Leucine rich repeat	3E-07	20	27.00	160	200
LRR_6	Leucine Rich repeat	0.014	6	23.40	163	178
LRR_1	Leucine Rich Repeat	0.0091	7	20.60	166	187
FNIP	FNIP Repeat	0.094	3	20.90	177	187
LRR_4	Leucine Rich repeats (2 copies)	0.0062	7	27.00	192	223
LRR_4	Leucine Rich repeats (2 copies)	0.073	4	27.00	212	235
LRR_8	Leucine rich repeat	0.033	4	27.00	212	232
LRR_1	Leucine Rich Repeat	0.0087	7	20.60	212	232
FNIP	FNIP Repeat	0.14	2	20.90	224	237
DUF4690	Small Novel Rich in Cartilage	0.00025	11	30.70	237	310
SARAF	SOCE-associated regulatory factor of calcium homoeostasis	7.1E-05	12	30.80	243	328
PRIMA1	Proline-rich membrane anchor 1	0.00016	11	27.60	247	318
VSP	Giardia variant-specific surface protein	7.3E-05	11	30.00	277	311
Pkinase	Protein kinase domain	0	131	20.40	420	688
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	136	23.10	421	690