c2pfam

AT3G16000.1 :

Domain Description Evalue Bits GA Start End
DUF5798 Family of unknown function (DUF5798) 1 -1 27.00 148 173
Crescentin Crescentin protein 0.57 -1 100.00 149 257
UPF0242 Uncharacterised protein family (UPF0242) 0.0027 7 23.70 151 258
Spc7 Spc7 kinetochore protein 0.0046 5 34.00 151 264
BRX_N Transcription factor BRX N-terminal domain 0.0002 11 24.50 151 167
DUF4201 Domain of unknown function (DUF4201) 0.0063 6 31.60 153 259
DUF1664 Protein of unknown function (DUF1664) 0.21 1 30.00 157 241
Pox_A_type_inc Viral A-type inclusion protein repeat 0.22 1 21.00 158 167
ATG16 Autophagy protein 16 (ATG16) 0.019 5 35.00 163 288
DUF5798 Family of unknown function (DUF5798) 0.48 0 27.00 186 214
DUF1664 Protein of unknown function (DUF1664) 0.026 4 30.00 229 302
DUF5798 Family of unknown function (DUF5798) 0.00096 9 27.00 230 268
Pox_A_type_inc Viral A-type inclusion protein repeat 0.0015 8 21.00 231 246
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 0.00061 9 30.00 250 368
UPF0242 Uncharacterised protein family (UPF0242) 0.025 4 23.70 262 348
Crescentin Crescentin protein 3.7E-05 13 100.00 264 481
DUF5798 Family of unknown function (DUF5798) 0.32 1 27.00 265 302
Spc7 Spc7 kinetochore protein 0.00043 9 34.00 267 377
DUF4201 Domain of unknown function (DUF4201) 0.00034 10 31.60 283 403
ATG16 Autophagy protein 16 (ATG16) 0.0094 6 35.00 294 363
UPF0242 Uncharacterised protein family (UPF0242) 3E-07 20 23.70 296 419
DUF1664 Protein of unknown function (DUF1664) 0.0066 6 30.00 300 366
DUF5798 Family of unknown function (DUF5798) 0.39 1 27.00 312 348
bZIP_1 bZIP transcription factor 1.8E-05 15 22.00 337 375
ATG16 Autophagy protein 16 (ATG16) 0.0089 6 35.00 348 493
Spc7 Spc7 kinetochore protein 3.3E-05 12 34.00 384 508
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 6.3E-08 22 30.00 387 490
bZIP_1 bZIP transcription factor 0.17 2 22.00 389 424
DUF1664 Protein of unknown function (DUF1664) 0.034 4 30.00 391 436
Crescentin Crescentin protein 0.0016 7 100.00 391 578
DUF4201 Domain of unknown function (DUF4201) 0.0012 8 31.60 392 482
DUF5798 Family of unknown function (DUF5798) 0.0062 6 27.00 393 430
UPF0242 Uncharacterised protein family (UPF0242) 0.071 3 23.70 418 476
ATG16 Autophagy protein 16 (ATG16) 0.026 4 35.00 435 544
DUF1664 Protein of unknown function (DUF1664) 0.00094 9 30.00 436 491
DUF5798 Family of unknown function (DUF5798) 3.1E-07 20 27.00 436 490
Pox_A_type_inc Viral A-type inclusion protein repeat 0.0017 8 21.00 451 467
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 0.025 4 30.00 495 607
bZIP_1 bZIP transcription factor 0.025 4 22.00 500 556
Crescentin Crescentin protein 3.2E-05 13 100.00 511 646
ATG16 Autophagy protein 16 (ATG16) 0.0054 7 35.00 513 633
DUF1664 Protein of unknown function (DUF1664) 0.00061 9 30.00 515 578
Spc7 Spc7 kinetochore protein 0.1 1 34.00 515 585
DUF5798 Family of unknown function (DUF5798) 0.072 3 27.00 546 584
DUF4201 Domain of unknown function (DUF4201) 0.016 5 31.60 551 677
bZIP_1 bZIP transcription factor 0.94 -1 22.00 557 577
UPF0242 Uncharacterised protein family (UPF0242) 0.14 2 23.70 578 657
bZIP_1 bZIP transcription factor 0.24 1 22.00 592 629
Spc7 Spc7 kinetochore protein 8.6E-05 11 34.00 595 722
BRX_N Transcription factor BRX N-terminal domain 0.22 1 24.50 596 603
DUF1664 Protein of unknown function (DUF1664) 0.0039 7 30.00 601 680
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 0.00044 10 30.00 613 688
DUF5798 Family of unknown function (DUF5798) 0.93 -1 27.00 620 666
ATG16 Autophagy protein 16 (ATG16) 0.045 4 35.00 632 678
Crescentin Crescentin protein 0.16 0 100.00 659 689
bZIP_1 bZIP transcription factor 0.058 3 22.00 660 690

726

DUF5798
Crescentin
UPF0242
Spc7
BRX_N
DUF4201
DUF1664
Pox_A_type_inc
ATG16
DUF5798
DUF1664
DUF5798
Pox_A_type_inc
CENP-F_leu_zip
UPF0242
Crescentin
DUF5798
Spc7
DUF4201
ATG16
UPF0242
DUF1664
DUF5798
bZIP_1
ATG16
Spc7
CENP-F_leu_zip
bZIP_1
DUF1664
Crescentin
DUF4201
DUF5798
UPF0242
ATG16
DUF1664
DUF5798
Pox_A_type_inc
CENP-F_leu_zip
bZIP_1
Crescentin
ATG16
DUF1664
Spc7
DUF5798
DUF4201
bZIP_1
UPF0242
bZIP_1
Spc7
BRX_N
DUF1664
CENP-F_leu_zip
DUF5798
ATG16
Crescentin
bZIP_1

References:

DUF1664

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

Crescentin

bZIP_1

DUF4201

ATG16
10406794 Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. EMBO J. 1999;18:3888-3896.
17012802 Expression, purification and crystallization of the Atg5-Atg16 complex essential for autophagy. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006;62:1021-1023.

DUF5798

BRX_N

UPF0242

CENP-F_leu_zip
7542657 CENP-F is a protein of the nuclear matrix that assembles onto kinetochores at late G2 and is rapidly degraded after mitosis. J Cell Biol. 1995;130:507-518.
14555653 LEK1 is a potential inhibitor of pocket protein-mediated cellular processes. J Biol Chem. 2004;279:664-676.

Pox_A_type_inc
2826668 Cloning and characterization of the gene encoding the major protein of the A-type inclusion body of cowpox virus. J Gen Virol 1988;69:35-47.

Domain	Description	Evalue	Bits	GA	Start	End
DUF5798	Family of unknown function (DUF5798)	1	-1	27.00	148	173
Crescentin	Crescentin protein	0.57	-1	100.00	149	257
UPF0242	Uncharacterised protein family (UPF0242)	0.0027	7	23.70	151	258
Spc7	Spc7 kinetochore protein	0.0046	5	34.00	151	264
BRX_N	Transcription factor BRX N-terminal domain	0.0002	11	24.50	151	167
DUF4201	Domain of unknown function (DUF4201)	0.0063	6	31.60	153	259
DUF1664	Protein of unknown function (DUF1664)	0.21	1	30.00	157	241
Pox_A_type_inc	Viral A-type inclusion protein repeat	0.22	1	21.00	158	167
ATG16	Autophagy protein 16 (ATG16)	0.019	5	35.00	163	288
DUF5798	Family of unknown function (DUF5798)	0.48	0	27.00	186	214
DUF1664	Protein of unknown function (DUF1664)	0.026	4	30.00	229	302
DUF5798	Family of unknown function (DUF5798)	0.00096	9	27.00	230	268
Pox_A_type_inc	Viral A-type inclusion protein repeat	0.0015	8	21.00	231	246
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	0.00061	9	30.00	250	368
UPF0242	Uncharacterised protein family (UPF0242)	0.025	4	23.70	262	348
Crescentin	Crescentin protein	3.7E-05	13	100.00	264	481
DUF5798	Family of unknown function (DUF5798)	0.32	1	27.00	265	302
Spc7	Spc7 kinetochore protein	0.00043	9	34.00	267	377
DUF4201	Domain of unknown function (DUF4201)	0.00034	10	31.60	283	403
ATG16	Autophagy protein 16 (ATG16)	0.0094	6	35.00	294	363
UPF0242	Uncharacterised protein family (UPF0242)	3E-07	20	23.70	296	419
DUF1664	Protein of unknown function (DUF1664)	0.0066	6	30.00	300	366
DUF5798	Family of unknown function (DUF5798)	0.39	1	27.00	312	348
bZIP_1	bZIP transcription factor	1.8E-05	15	22.00	337	375
ATG16	Autophagy protein 16 (ATG16)	0.0089	6	35.00	348	493
Spc7	Spc7 kinetochore protein	3.3E-05	12	34.00	384	508
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	6.3E-08	22	30.00	387	490
bZIP_1	bZIP transcription factor	0.17	2	22.00	389	424
DUF1664	Protein of unknown function (DUF1664)	0.034	4	30.00	391	436
Crescentin	Crescentin protein	0.0016	7	100.00	391	578
DUF4201	Domain of unknown function (DUF4201)	0.0012	8	31.60	392	482
DUF5798	Family of unknown function (DUF5798)	0.0062	6	27.00	393	430
UPF0242	Uncharacterised protein family (UPF0242)	0.071	3	23.70	418	476
ATG16	Autophagy protein 16 (ATG16)	0.026	4	35.00	435	544
DUF1664	Protein of unknown function (DUF1664)	0.00094	9	30.00	436	491
DUF5798	Family of unknown function (DUF5798)	3.1E-07	20	27.00	436	490
Pox_A_type_inc	Viral A-type inclusion protein repeat	0.0017	8	21.00	451	467
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	0.025	4	30.00	495	607
bZIP_1	bZIP transcription factor	0.025	4	22.00	500	556
Crescentin	Crescentin protein	3.2E-05	13	100.00	511	646
ATG16	Autophagy protein 16 (ATG16)	0.0054	7	35.00	513	633
DUF1664	Protein of unknown function (DUF1664)	0.00061	9	30.00	515	578
Spc7	Spc7 kinetochore protein	0.1	1	34.00	515	585
DUF5798	Family of unknown function (DUF5798)	0.072	3	27.00	546	584
DUF4201	Domain of unknown function (DUF4201)	0.016	5	31.60	551	677
bZIP_1	bZIP transcription factor	0.94	-1	22.00	557	577
UPF0242	Uncharacterised protein family (UPF0242)	0.14	2	23.70	578	657
bZIP_1	bZIP transcription factor	0.24	1	22.00	592	629
Spc7	Spc7 kinetochore protein	8.6E-05	11	34.00	595	722
BRX_N	Transcription factor BRX N-terminal domain	0.22	1	24.50	596	603
DUF1664	Protein of unknown function (DUF1664)	0.0039	7	30.00	601	680
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	0.00044	10	30.00	613	688
DUF5798	Family of unknown function (DUF5798)	0.93	-1	27.00	620	666
ATG16	Autophagy protein 16 (ATG16)	0.045	4	35.00	632	678
Crescentin	Crescentin protein	0.16	0	100.00	659	689
bZIP_1	bZIP transcription factor	0.058	3	22.00	660	690