c2pfam

AT3G17240.1 :

Domain Description Evalue Bits GA Start End
AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain 4.2E-05 13 20.30 42 76
Thi4 Thi4 family 2.8E-07 20 20.00 44 113
FAD_binding_3 FAD binding domain 2.7E-06 17 20.10 45 76
Lycopene_cycl Lycopene cyclase protein 2.7E-05 14 23.40 45 185
DAO FAD dependent oxidoreductase 1.9E-05 15 24.70 45 81
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 0 235 22.80 45 369
FAD_oxidored FAD dependent oxidoreductase 2.3E-13 40 27.00 45 82
GIDA Glucose inhibited division protein A 1.3E-13 41 20.00 45 190
FAD_binding_2 FAD binding domain 4.8E-10 29 20.40 45 81
HI0933_like HI0933-like protein 1.4E-07 21 20.30 45 79
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 2.6E-05 15 22.00 46 79
UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 0.57 0 20.50 46 73
XdhC_C XdhC Rossmann domain 0.016 6 29.70 46 84
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 5E-05 13 30.00 47 79
NAD_binding_8 NAD(P)-binding Rossmann-like domain 1.5E-08 25 21.90 48 85
3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 0.044 4 20.90 101 149
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.00077 9 21.00 162 228
DAO FAD dependent oxidoreductase 0.68 0 24.70 166 192
Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 1.7E-13 41 30.00 168 353
AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain 0.00039 10 20.30 214 271
Thi4 Thi4 family 0.26 1 20.00 215 244
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 1.5E-22 70 22.00 216 289
HI0933_like HI0933-like protein 0.045 3 20.30 216 246
UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2.5E-06 17 20.50 216 265
XdhC_C XdhC Rossmann domain 0.022 6 29.70 217 248
GIDA Glucose inhibited division protein A 0.033 3 20.00 217 243
DAO FAD dependent oxidoreductase 0.061 3 24.70 217 244
Lycopene_cycl Lycopene cyclase protein 0.058 3 23.40 217 249
3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 1.3E-06 19 20.90 218 271
FAD_binding_3 FAD binding domain 0.016 5 20.10 218 251
NAD_binding_8 NAD(P)-binding Rossmann-like domain 0.12 3 21.90 219 246
HI0933_like HI0933-like protein 0.026 3 20.30 257 313
FAD_binding_2 FAD binding domain 0.29 0 20.40 258 313
FAD_oxidored FAD dependent oxidoreductase 0.049 3 27.00 260 308
Lycopene_cycl Lycopene cyclase protein 0.52 -1 23.40 260 314
DAO FAD dependent oxidoreductase 0.0076 6 24.70 261 313
K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring) 0.00033 10 21.00 262 313
FAD_binding_3 FAD binding domain 0.018 5 20.10 263 331
Thi4 Thi4 family 0.35 0 20.00 301 324
FAD_binding_2 FAD binding domain 0.0041 6 20.40 326 358
Pyr_redox_dim Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 0 135 25.00 388 497
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 0.65 -1 22.80 398 447

507

AlaDh_PNT_C
Thi4
FAD_binding_3
Lycopene_cycl
DAO
Pyr_redox_2
FAD_oxidored
GIDA
FAD_binding_2
HI0933_like
Pyr_redox
UDPG_MGDP_dh_N
XdhC_C
Pyr_redox_3
NAD_binding_8
3HCDH_N
K_oxygenase
DAO
Pyr_redox_3
AlaDh_PNT_C
Thi4
Pyr_redox
HI0933_like
UDPG_MGDP_dh_N
XdhC_C
GIDA
DAO
Lycopene_cycl
3HCDH_N
FAD_binding_3
NAD_binding_8
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
DAO
K_oxygenase
FAD_binding_3
Thi4
FAD_binding_2
Pyr_redox_dim
Pyr_redox_2

References:

FAD_binding_2
8061609 Structure of glutathione reductase from Escherichia coli at 1.86 A resolution: comparison with the enzyme from human erythrocytes. Protein Sci 1994;3:799-809.

XdhC_C

3HCDH_N
3479790 Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary chain tracing at 2.8-A resolution. Proc Natl Acad Sci U S A 1987;84:8262-8266.

Lycopene_cycl
8837512 Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation. Plant Cell 1996;8:1613-1626.
11226339 One ring or two? Determination of ring number in carotenoids by lycopene epsilon-cyclases. Proc Natl Acad Sci U S A 2001;98:2905-2910.

Thi4
7961415 Cloning, nucleotide sequence, and regulation of Schizosaccharomyces pombe thi4, a thiamine biosynthetic gene. J Bacteriol 1994;176:6631-6635.

HI0933_like

FAD_binding_3
1409567 Crystal structure of the reduced form of p-hydroxybenzoate hydroxylase refined at 2.3A resolution. Proteins 1992;14:178-190.

Pyr_redox_2
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

DAO
9153426 Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry 1997;36:5853-5860.

UDPG_MGDP_dh_N
2470755 Purification and characterization of guanosine diphospho-D-mannose dehydrogenase. A key enzyme in the biosynthesis of alginate by Pseudomonas aeruginosa. J Biol Chem 1989;264:9380-9385.
9013585 Properties and kinetic analysis of UDP-glucose dehydrogenase from group A streptococci. Irreversible inhibition by UDP-chloroacetol. J Biol Chem 1997;272:3416-3422.

Pyr_redox
8805537 Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Structure 1996;4:277-286.

GIDA

Pyr_redox_3

FAD_oxidored

AlaDh_PNT_C
11354603 Lysine metabolism in higher plants. Amino Acids 2001;20:261-279.

K_oxygenase

Pyr_redox_dim
8771196 The crystal structure of trypanothione reductase from the human pathogen Trypanosoma cruzi at 2.3 A resolution. Protein Sci 1996;5:52-61.

NAD_binding_8

Domain	Description	Evalue	Bits	GA	Start	End
AlaDh_PNT_C	Alanine dehydrogenase/PNT, C-terminal domain	4.2E-05	13	20.30	42	76
Thi4	Thi4 family	2.8E-07	20	20.00	44	113
FAD_binding_3	FAD binding domain	2.7E-06	17	20.10	45	76
Lycopene_cycl	Lycopene cyclase protein	2.7E-05	14	23.40	45	185
DAO	FAD dependent oxidoreductase	1.9E-05	15	24.70	45	81
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	0	235	22.80	45	369
FAD_oxidored	FAD dependent oxidoreductase	2.3E-13	40	27.00	45	82
GIDA	Glucose inhibited division protein A	1.3E-13	41	20.00	45	190
FAD_binding_2	FAD binding domain	4.8E-10	29	20.40	45	81
HI0933_like	HI0933-like protein	1.4E-07	21	20.30	45	79
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	2.6E-05	15	22.00	46	79
UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	0.57	0	20.50	46	73
XdhC_C	XdhC Rossmann domain	0.016	6	29.70	46	84
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	5E-05	13	30.00	47	79
NAD_binding_8	NAD(P)-binding Rossmann-like domain	1.5E-08	25	21.90	48	85
3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	0.044	4	20.90	101	149
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.00077	9	21.00	162	228
DAO	FAD dependent oxidoreductase	0.68	0	24.70	166	192
Pyr_redox_3	Pyridine nucleotide-disulphide oxidoreductase	1.7E-13	41	30.00	168	353
AlaDh_PNT_C	Alanine dehydrogenase/PNT, C-terminal domain	0.00039	10	20.30	214	271
Thi4	Thi4 family	0.26	1	20.00	215	244
Pyr_redox	Pyridine nucleotide-disulphide oxidoreductase	1.5E-22	70	22.00	216	289
HI0933_like	HI0933-like protein	0.045	3	20.30	216	246
UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	2.5E-06	17	20.50	216	265
XdhC_C	XdhC Rossmann domain	0.022	6	29.70	217	248
GIDA	Glucose inhibited division protein A	0.033	3	20.00	217	243
DAO	FAD dependent oxidoreductase	0.061	3	24.70	217	244
Lycopene_cycl	Lycopene cyclase protein	0.058	3	23.40	217	249
3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	1.3E-06	19	20.90	218	271
FAD_binding_3	FAD binding domain	0.016	5	20.10	218	251
NAD_binding_8	NAD(P)-binding Rossmann-like domain	0.12	3	21.90	219	246
HI0933_like	HI0933-like protein	0.026	3	20.30	257	313
FAD_binding_2	FAD binding domain	0.29	0	20.40	258	313
FAD_oxidored	FAD dependent oxidoreductase	0.049	3	27.00	260	308
Lycopene_cycl	Lycopene cyclase protein	0.52	-1	23.40	260	314
DAO	FAD dependent oxidoreductase	0.0076	6	24.70	261	313
K_oxygenase	L-lysine 6-monooxygenase (NADPH-requiring)	0.00033	10	21.00	262	313
FAD_binding_3	FAD binding domain	0.018	5	20.10	263	331
Thi4	Thi4 family	0.35	0	20.00	301	324
FAD_binding_2	FAD binding domain	0.0041	6	20.40	326	358
Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	0	135	25.00	388	497
Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	0.65	-1	22.80	398	447