c2pfam

AT3G17840.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 3.2E-12 37 20.70 32 68
LRR_8 Leucine rich repeat 2.5E-08 24 27.00 85 131
LRR_4 Leucine Rich repeats (2 copies) 9.8E-07 19 27.00 95 135
LRR_6 Leucine Rich repeat 0.027 5 23.40 95 109
LRR_1 Leucine Rich Repeat 0.25 3 20.60 96 118
LRR_6 Leucine Rich repeat 0.13 3 23.40 117 134
LRR_1 Leucine Rich Repeat 0.025 6 20.60 121 137
LRR_8 Leucine rich repeat 1E-10 31 27.00 121 179
LRR_2 Leucine Rich Repeat 0.12 3 20.90 121 134
LRR_6 Leucine Rich repeat 0.091 3 23.40 143 158
LRR_1 Leucine Rich Repeat 0.021 6 20.60 144 166
LRR_4 Leucine Rich repeats (2 copies) 0.0003 11 27.00 144 181
LRR_6 Leucine Rich repeat 0.24 2 23.40 167 181
LRR_1 Leucine Rich Repeat 0.16 3 20.60 168 184
LRR_2 Leucine Rich Repeat 0.0065 7 20.90 169 182
LRR_8 Leucine rich repeat 0.27 1 27.00 189 211
Podoplanin Podoplanin 4.9E-05 14 29.00 248 290
T2SSF Type II secretion system (T2SS), protein F 0.019 5 25.20 253 284
Mid2 Mid2 like cell wall stress sensor 7.4E-05 13 23.10 254 288
Amnionless Amnionless 9.3E-05 11 30.40 256 310
DUF4690 Small Novel Rich in Cartilage 0.0002 12 30.70 259 290
PTP_tm Transmembrane domain of protein tyrosine phosphatase, receptor type J 0.00034 11 26.20 264 288
EphA2_TM Ephrin type-A receptor 2 transmembrane domain 0.00019 12 28.90 266 300
Pkinase Protein kinase domain 0 130 20.40 368 632
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 126 23.10 369 634
T2SSF Type II secretion system (T2SS), protein F 0.039 4 25.20 565 623

647

LRRNT_2
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_8
LRR_2
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
LRR_2
LRR_8
Podoplanin
T2SSF
Mid2
Amnionless
DUF4690
PTP_tm
EphA2_TM
Pkinase
PK_Tyr_Ser-Thr
T2SSF

References:

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

T2SSF

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

Podoplanin
12032185 Cloning and expression of the mouse glomerular podoplanin homologue gp38P. Nephrol Dial Transplant 2002;17:978-984.

DUF4690

PTP_tm

PK_Tyr_Ser-Thr

Mid2
11113201 Wsc1 and Mid2 are cell surface sensors for cell wall integrity signaling that act through Rom2, a guanine nucleotide exchange factor for Rho1. Mol Cell Biol 2001;21:271-280.

Amnionless

EphA2_TM

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	3.2E-12	37	20.70	32	68
LRR_8	Leucine rich repeat	2.5E-08	24	27.00	85	131
LRR_4	Leucine Rich repeats (2 copies)	9.8E-07	19	27.00	95	135
LRR_6	Leucine Rich repeat	0.027	5	23.40	95	109
LRR_1	Leucine Rich Repeat	0.25	3	20.60	96	118
LRR_6	Leucine Rich repeat	0.13	3	23.40	117	134
LRR_1	Leucine Rich Repeat	0.025	6	20.60	121	137
LRR_8	Leucine rich repeat	1E-10	31	27.00	121	179
LRR_2	Leucine Rich Repeat	0.12	3	20.90	121	134
LRR_6	Leucine Rich repeat	0.091	3	23.40	143	158
LRR_1	Leucine Rich Repeat	0.021	6	20.60	144	166
LRR_4	Leucine Rich repeats (2 copies)	0.0003	11	27.00	144	181
LRR_6	Leucine Rich repeat	0.24	2	23.40	167	181
LRR_1	Leucine Rich Repeat	0.16	3	20.60	168	184
LRR_2	Leucine Rich Repeat	0.0065	7	20.90	169	182
LRR_8	Leucine rich repeat	0.27	1	27.00	189	211
Podoplanin	Podoplanin	4.9E-05	14	29.00	248	290
T2SSF	Type II secretion system (T2SS), protein F	0.019	5	25.20	253	284
Mid2	Mid2 like cell wall stress sensor	7.4E-05	13	23.10	254	288
Amnionless	Amnionless	9.3E-05	11	30.40	256	310
DUF4690	Small Novel Rich in Cartilage	0.0002	12	30.70	259	290
PTP_tm	Transmembrane domain of protein tyrosine phosphatase, receptor type J	0.00034	11	26.20	264	288
EphA2_TM	Ephrin type-A receptor 2 transmembrane domain	0.00019	12	28.90	266	300
Pkinase	Protein kinase domain	0	130	20.40	368	632
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	126	23.10	369	634
T2SSF	Type II secretion system (T2SS), protein F	0.039	4	25.20	565	623