c2pfam

AT3G17880.1 :

Domain Description Evalue Bits GA Start End
HipN Hsp70-interacting protein N N-terminal domain 2.8E-19 59 23.00 3 44
AhpC-TSA AhpC/TSA family 0.13 3 20.70 7 35
TraF F plasmid transfer operon protein 0.31 1 23.00 96 145
HemY_N HemY protein N-terminus 0.002 9 28.20 108 153
TPR_1 Tetratricopeptide repeat 1.6E-06 18 20.40 117 144
TPR_16 Tetratricopeptide repeat 0.0016 10 32.70 118 175
TPR_8 Tetratricopeptide repeat 0.00012 13 25.70 119 144
MAS20 MAS20 protein import receptor 0.014 6 21.50 121 147
TPR_2 Tetratricopeptide repeat 2.7E-06 18 22.40 122 144
TPR_9 Tetratricopeptide repeat 0.0061 7 35.00 123 168
DUF4407 Domain of unknown function (DUF4407) 0.002 8 31.30 123 301
TPR_19 Tetratricopeptide repeat 0.00011 13 25.00 123 166
TPR_14 Tetratricopeptide repeat 0.00039 12 23.50 125 149
TPR_11 TPR repeat 1E-06 19 26.80 126 158
TPR_17 Tetratricopeptide repeat 0.012 7 24.40 137 166
TPR_2 Tetratricopeptide repeat 0.11 4 22.40 146 177
TPR_1 Tetratricopeptide repeat 0.031 5 20.40 147 178
TPR_16 Tetratricopeptide repeat 0.3 3 32.70 153 201
TPR_9 Tetratricopeptide repeat 1.1E-07 23 35.00 160 210
TPR_11 TPR repeat 0.14 3 26.80 171 194
TPR_17 Tetratricopeptide repeat 0.63 1 24.40 172 199
TPR_1 Tetratricopeptide repeat 0.0013 9 20.40 180 202
TPR_2 Tetratricopeptide repeat 0.00044 11 22.40 180 210
HemY_N HemY protein N-terminus 0.031 5 28.20 184 212
TPR_19 Tetratricopeptide repeat 1 1 25.00 193 213
TPR_11 TPR repeat 0.044 4 26.80 193 210
PCB_OB Penicillin-binding protein OB-like domain 0.0015 10 27.00 194 280
TraF F plasmid transfer operon protein 0.67 0 23.00 225 268
OST3_OST6 OST3 / OST6 family 2.1E-07 21 21.30 270 357
Thioredoxin_9 Thioredoxin 1.6E-05 15 25.00 274 352
Thioredoxin_7 Thioredoxin-like 3.2E-08 24 27.00 279 352
Thioredoxin Thioredoxin 9.8E-27 84 22.10 288 374
TraF F plasmid transfer operon protein 5.2E-05 14 23.00 289 363
Thioredoxin_2 Thioredoxin-like domain 1.4E-06 19 27.00 289 364
Thioredoxin_8 Thioredoxin-like 2.3E-06 18 27.00 293 334
AhpC-TSA AhpC/TSA family 0.00026 12 20.70 293 337
Thioredoxin_8 Thioredoxin-like 0.32 2 27.00 327 356

380

HipN
AhpC-TSA
TraF
HemY_N
TPR_1
TPR_16
TPR_8
MAS20
TPR_2
TPR_9
DUF4407
TPR_19
TPR_14
TPR_11
TPR_17
TPR_2
TPR_1
TPR_16
TPR_9
TPR_11
TPR_17
TPR_1
TPR_2
HemY_N
TPR_19
TPR_11
PCB_OB
TraF
OST3_OST6
Thioredoxin_9
Thioredoxin_7
Thioredoxin
TraF
Thioredoxin_2
Thioredoxin_8
AhpC-TSA
Thioredoxin_8

References:

DUF4407

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

TPR_8

TPR_11

PCB_OB

Thioredoxin_8

Thioredoxin_7

HipN

Thioredoxin_2

Thioredoxin_9

OST3_OST6
7622558 Functional characterization of Ost3p. Loss of the 34-kD subunit of the Saccharomyces cerevisiae oligosaccharyltransferase results in biased underglycosylation of acceptor substrates. J Cell Biol 1995;130:567-577.
10358084 The oligosaccharyltransferase complex from Saccharomyces cerevisiae. Isolation of the OST6 gene, its synthetic interaction with OST3, and analysis of the native complex. J Biol Chem 1999;274:17249-17256.

MAS20

Thioredoxin

TraF

HemY_N
7928957 Bacillus subtilis HemY is a peripheral membrane protein essential for protoheme IX synthesis which can oxidize coproporphyrinogen III and protoporphyrinogen IX. J Bacteriol 1994;176:5962-5970.

TPR_14

TPR_9

AhpC-TSA
8041738 Cloning and sequencing of thiol-specific antioxidant from mammalian brain: alkyl hydroperoxide reductase and thiol-specific antioxidant define a large family of antioxidant enzymes. Proc Natl Acad Sci U S A 1994;91:7017-7021.

Domain	Description	Evalue	Bits	GA	Start	End
HipN	Hsp70-interacting protein N N-terminal domain	2.8E-19	59	23.00	3	44
AhpC-TSA	AhpC/TSA family	0.13	3	20.70	7	35
TraF	F plasmid transfer operon protein	0.31	1	23.00	96	145
HemY_N	HemY protein N-terminus	0.002	9	28.20	108	153
TPR_1	Tetratricopeptide repeat	1.6E-06	18	20.40	117	144
TPR_16	Tetratricopeptide repeat	0.0016	10	32.70	118	175
TPR_8	Tetratricopeptide repeat	0.00012	13	25.70	119	144
MAS20	MAS20 protein import receptor	0.014	6	21.50	121	147
TPR_2	Tetratricopeptide repeat	2.7E-06	18	22.40	122	144
TPR_9	Tetratricopeptide repeat	0.0061	7	35.00	123	168
DUF4407	Domain of unknown function (DUF4407)	0.002	8	31.30	123	301
TPR_19	Tetratricopeptide repeat	0.00011	13	25.00	123	166
TPR_14	Tetratricopeptide repeat	0.00039	12	23.50	125	149
TPR_11	TPR repeat	1E-06	19	26.80	126	158
TPR_17	Tetratricopeptide repeat	0.012	7	24.40	137	166
TPR_2	Tetratricopeptide repeat	0.11	4	22.40	146	177
TPR_1	Tetratricopeptide repeat	0.031	5	20.40	147	178
TPR_16	Tetratricopeptide repeat	0.3	3	32.70	153	201
TPR_9	Tetratricopeptide repeat	1.1E-07	23	35.00	160	210
TPR_11	TPR repeat	0.14	3	26.80	171	194
TPR_17	Tetratricopeptide repeat	0.63	1	24.40	172	199
TPR_1	Tetratricopeptide repeat	0.0013	9	20.40	180	202
TPR_2	Tetratricopeptide repeat	0.00044	11	22.40	180	210
HemY_N	HemY protein N-terminus	0.031	5	28.20	184	212
TPR_19	Tetratricopeptide repeat	1	1	25.00	193	213
TPR_11	TPR repeat	0.044	4	26.80	193	210
PCB_OB	Penicillin-binding protein OB-like domain	0.0015	10	27.00	194	280
TraF	F plasmid transfer operon protein	0.67	0	23.00	225	268
OST3_OST6	OST3 / OST6 family	2.1E-07	21	21.30	270	357
Thioredoxin_9	Thioredoxin	1.6E-05	15	25.00	274	352
Thioredoxin_7	Thioredoxin-like	3.2E-08	24	27.00	279	352
Thioredoxin	Thioredoxin	9.8E-27	84	22.10	288	374
TraF	F plasmid transfer operon protein	5.2E-05	14	23.00	289	363
Thioredoxin_2	Thioredoxin-like domain	1.4E-06	19	27.00	289	364
Thioredoxin_8	Thioredoxin-like	2.3E-06	18	27.00	293	334
AhpC-TSA	AhpC/TSA family	0.00026	12	20.70	293	337
Thioredoxin_8	Thioredoxin-like	0.32	2	27.00	327	356