c2pfam

AT3G18130.1 :

Domain Description Evalue Bits GA Start End
WD40 WD domain, G-beta repeat 1.1E-05 15 21.00 10 44
Nup160 Nucleoporin Nup120/160 0.043 1 19.20 14 46
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 1.5E-05 14 22.90 27 113
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.0013 7 29.50 43 97
WD40 WD domain, G-beta repeat 1.1E-10 31 21.00 56 91
Cytochrom_D1 Cytochrome D1 heme domain 5.3E-05 11 19.80 67 123
Nup160 Nucleoporin Nup120/160 0.00041 8 19.20 68 99
WD40_like WD40-like domain 0.011 4 40.00 70 132
eIF2A Eukaryotic translation initiation factor eIF2A 0.16 1 20.50 81 126
WD40 WD domain, G-beta repeat 1.8E-11 34 21.00 96 133
Nup160 Nucleoporin Nup120/160 0.00041 8 19.20 110 137
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.014 5 22.90 112 185
WD40 WD domain, G-beta repeat 7.9E-10 28 21.00 138 179
eIF2A Eukaryotic translation initiation factor eIF2A 1.1E-05 14 20.50 152 269
Nup160 Nucleoporin Nup120/160 0.0019 6 19.20 165 184
WD40 WD domain, G-beta repeat 6.6E-10 29 21.00 187 221
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00047 10 22.90 191 234
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.004 5 29.50 191 221
WD40_like WD40-like domain 8.3E-05 11 40.00 198 296
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 1.3E-06 18 22.90 202 274
Cytochrom_D1 Cytochrome D1 heme domain 0.0029 5 19.80 216 276
WD40 WD domain, G-beta repeat 3.4E-08 23 21.00 226 261
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.0003 9 29.50 253 323
Nup160 Nucleoporin Nup120/160 0.004 5 19.20 254 298
WD40 WD domain, G-beta repeat 3.2E-07 20 21.00 288 321
eIF2A Eukaryotic translation initiation factor eIF2A 0.39 -1 20.50 291 314
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00016 11 22.90 295 320
Nup160 Nucleoporin Nup120/160 0.39 -2 19.20 305 321

326

WD40
Nup160
ANAPC4_WD40
Ge1_WD40
WD40
Cytochrom_D1
Nup160
WD40_like
eIF2A
WD40
Nup160
ANAPC4_WD40
WD40
eIF2A
Nup160
WD40
ANAPC4_WD40
Ge1_WD40
WD40_like
ANAPC4_WD40
Cytochrom_D1
WD40
Ge1_WD40
Nup160
WD40
eIF2A
ANAPC4_WD40
Nup160

References:

ANAPC4_WD40

Ge1_WD40

WD40_like

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

Cytochrom_D1
9311786 Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme. Nature 1997;389:406-412.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

eIF2A
12133843 Characterization of mammalian eIF2A and identification of the yeast homolog. J Biol Chem. 2002;277:37079-37087.

Domain	Description	Evalue	Bits	GA	Start	End
WD40	WD domain, G-beta repeat	1.1E-05	15	21.00	10	44
Nup160	Nucleoporin Nup120/160	0.043	1	19.20	14	46
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	1.5E-05	14	22.90	27	113
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.0013	7	29.50	43	97
WD40	WD domain, G-beta repeat	1.1E-10	31	21.00	56	91
Cytochrom_D1	Cytochrome D1 heme domain	5.3E-05	11	19.80	67	123
Nup160	Nucleoporin Nup120/160	0.00041	8	19.20	68	99
WD40_like	WD40-like domain	0.011	4	40.00	70	132
eIF2A	Eukaryotic translation initiation factor eIF2A	0.16	1	20.50	81	126
WD40	WD domain, G-beta repeat	1.8E-11	34	21.00	96	133
Nup160	Nucleoporin Nup120/160	0.00041	8	19.20	110	137
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.014	5	22.90	112	185
WD40	WD domain, G-beta repeat	7.9E-10	28	21.00	138	179
eIF2A	Eukaryotic translation initiation factor eIF2A	1.1E-05	14	20.50	152	269
Nup160	Nucleoporin Nup120/160	0.0019	6	19.20	165	184
WD40	WD domain, G-beta repeat	6.6E-10	29	21.00	187	221
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00047	10	22.90	191	234
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.004	5	29.50	191	221
WD40_like	WD40-like domain	8.3E-05	11	40.00	198	296
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	1.3E-06	18	22.90	202	274
Cytochrom_D1	Cytochrome D1 heme domain	0.0029	5	19.80	216	276
WD40	WD domain, G-beta repeat	3.4E-08	23	21.00	226	261
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.0003	9	29.50	253	323
Nup160	Nucleoporin Nup120/160	0.004	5	19.20	254	298
WD40	WD domain, G-beta repeat	3.2E-07	20	21.00	288	321
eIF2A	Eukaryotic translation initiation factor eIF2A	0.39	-1	20.50	291	314
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00016	11	22.90	295	320
Nup160	Nucleoporin Nup120/160	0.39	-2	19.20	305	321