c2pfam

AT3G18610.1 :

Domain Description Evalue Bits GA Start End
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.6E-18 53 20.70 386 453
RRM_3 RNA binding motif 2.4E-05 13 21.30 387 443
RRM_occluded Occluded RNA-recognition motif 0.0003 9 30.00 390 454
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00062 8 27.00 399 441
Nup35_RRM Nup53/35/40-type RNA recognition motif 0.00043 9 20.90 424 450
Nup35_RRM Nup53/35/40-type RNA recognition motif 0.017 4 20.90 478 511
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 5.5E-06 15 27.00 478 527
RRM_occluded Occluded RNA-recognition motif 0.066 2 30.00 480 553
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.1E-11 33 20.70 482 551
RRM_3 RNA binding motif 0.085 2 21.30 491 523

636

RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Nup35_RRM
Nup35_RRM
Nup35_RRM_2
RRM_occluded
RRM_1
RRM_3

References:

Nup35_RRM_2

Nup35_RRM

RRM_3
12842046 Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element. Structure. 2003;11:833-843.

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

RRM_occluded

Domain	Description	Evalue	Bits	GA	Start	End
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	6.6E-18	53	20.70	386	453
RRM_3	RNA binding motif	2.4E-05	13	21.30	387	443
RRM_occluded	Occluded RNA-recognition motif	0.0003	9	30.00	390	454
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00062	8	27.00	399	441
Nup35_RRM	Nup53/35/40-type RNA recognition motif	0.00043	9	20.90	424	450
Nup35_RRM	Nup53/35/40-type RNA recognition motif	0.017	4	20.90	478	511
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	5.5E-06	15	27.00	478	527
RRM_occluded	Occluded RNA-recognition motif	0.066	2	30.00	480	553
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.1E-11	33	20.70	482	551
RRM_3	RNA binding motif	0.085	2	21.30	491	523