c2pfam

AT3G18890.1 :

Domain Description Evalue Bits GA Start End
NmrA NmrA-like family 4.1E-15 45 20.60 84 215
Epimerase NAD dependent epimerase/dehydratase family 1.6E-10 30 20.60 84 211
Polysacc_synt_2 Polysaccharide biosynthesis protein 7.8E-06 14 20.20 84 210
adh_short short chain dehydrogenase 2.9E-05 13 20.50 84 160
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 1.5E-05 14 27.00 85 164
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 1.9E-10 29 20.00 86 212
NAD_binding_4 Male sterility protein 5.5E-06 15 20.10 87 209
NAD_binding_10 NAD(P)H-binding 8.5E-35 110 27.20 88 298
HIM1 HIM1 3.2E-06 16 28.70 141 214
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 0.39 -1 27.00 432 449

641

NmrA
Epimerase
Polysacc_synt_2
adh_short
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
HIM1
GDP_Man_Dehyd

References:

adh_short
9735295 The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution. J Mol Biol 1998;282:383-399.
10387002 Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry 1999;38:7630-7637.

GDP_Man_Dehyd

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

HIM1
15885712 HIM1, a new yeast Saccharomyces cerevisiae gene playing a role in control of spontaneous and induced mutagenesis. Mutat Res. 2005;578:64-78.
15886085 The Schizosaccharomyces pombe imprint--nick or ribonucleotide(s)?. Curr Biol. 2005; [Epub ahead of print]

3Beta_HSD
1562516 Structure and tissue-specific expression of 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase genes in human and rat classical and peripheral steroidogenic tissues. J Steroid Biochem Mol Biol 1992;41:421-435.

NmrA
11726498 The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/reductases. EMBO J 2001;20:6619-6626.

NAD_binding_10

NAD_binding_4
9351246 The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes. Plant J 1997;12:615-623.

Domain	Description	Evalue	Bits	GA	Start	End
NmrA	NmrA-like family	4.1E-15	45	20.60	84	215
Epimerase	NAD dependent epimerase/dehydratase family	1.6E-10	30	20.60	84	211
Polysacc_synt_2	Polysaccharide biosynthesis protein	7.8E-06	14	20.20	84	210
adh_short	short chain dehydrogenase	2.9E-05	13	20.50	84	160
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	1.5E-05	14	27.00	85	164
3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	1.9E-10	29	20.00	86	212
NAD_binding_4	Male sterility protein	5.5E-06	15	20.10	87	209
NAD_binding_10	NAD(P)H-binding	8.5E-35	110	27.20	88	298
HIM1	HIM1	3.2E-06	16	28.70	141	214
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	0.39	-1	27.00	432	449