c2pfam

AT3G23210.1 :

Domain Description Evalue Bits GA Start End
Macoilin Transmembrane protein 0.0004 9 32.00 117 263
SCRL Plant self-incompatibility response (SCRL) protein 5.1E-06 17 21.80 137 177
HLH Helix-loop-helix DNA-binding domain 1.4E-11 35 20.70 166 213
NRBF2 Nuclear receptor-binding factor 2, autophagy regulator 0.00022 11 36.80 191 245
PPS_PS Phosphopantothenate/pantothenate synthetase 0.0001 12 26.40 193 236
HAUS-augmin3 HAUS augmin-like complex subunit 3 0.00011 12 27.80 197 261
CENP-H Centromere protein H (CENP-H) 0.0011 10 23.00 206 260
ZapB Cell division protein ZapB 2.9E-05 15 31.20 206 262
DUF4201 Domain of unknown function (DUF4201) 2.7E-05 14 31.60 208 262
Cluap1 Clusterin-associated protein-1 6.3E-05 13 24.00 208 270
DUF3450 Protein of unknown function (DUF3450) 0.00039 10 26.90 208 261
APG6_N Apg6 coiled-coil region 0.00011 13 45.00 209 258
TMF_DNA_bd TATA element modulatory factor 1 DNA binding 2E-05 15 35.00 210 262
DivIC Septum formation initiator 0.00092 9 24.00 210 244
DUF2205 Predicted coiled-coil protein (DUF2205) 0.00031 11 26.70 211 249
DUF5082 Domain of unknown function (DUF5082) 0.0006 10 33.70 211 262
YabA Initiation control protein YabA 2.2E-05 15 30.00 215 260
DivIC Septum formation initiator 0.13 2 24.00 234 260

320

Macoilin
SCRL
HLH
NRBF2
PPS_PS
HAUS-augmin3
CENP-H
ZapB
DUF4201
Cluap1
DUF3450
APG6_N
TMF_DNA_bd
DivIC
DUF2205
DUF5082
YabA
DivIC

References:

NRBF2

TMF_DNA_bd
9742951 Tyrosine phosphorylation of the TATA element modulatory factor by the FER nuclear tyrosine kinases. FEBS Lett. 1998;434:339-345.
1409643 Cloning and chromosomal mapping of a human immunodeficiency virus 1 "TATA" element modulatory factor. Proc Natl Acad Sci U S A. 1992;89:9372-9376.
15128430 TMF is a golgin that binds Rab6 and influences Golgi morphology. BMC Cell Biol. 2004;5:18.
18182439 Localization and domain characterization of Arabidopsis golgin candidates. J Exp Bot. 2007;58:4373-4386.

DivIC
8113187 Characterization of a cell division gene from Bacillus subtilis that is required for vegetative and sporulation septum formation. J Bacteriol 1994;176:1451-1459.

PPS_PS

HAUS-augmin3

Macoilin
17341690 An improved method for the analysis of membrane proteins by mass spectrometry. Physiol Genomics. 2007; [Epub ahead of print]

DUF4201

SCRL
11437247 Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response. Plant Mol Biol 2001;46:17-34.

APG6_N

Cluap1
15480429 Isolation and characterization of a novel gene CLUAP1 whose expression is frequently upregulated in colon cancer. Oncogene. 2004;23:9289-9294.

DUF2205

HLH
7553065 Transcription factors 2: helix-loop-helix. Protein Profile 1995;2:621-702.

DUF5082

ZapB

DUF3450

YabA

CENP-H
10488063 Characterization of a novel kinetochore protein, CENP-H. J Biol Chem 1999;274:27343-27346.
11500386 CENP-H, a constitutive centromere component, is required for centromere targeting of CENP-C in vertebrate cells. EMBO J 2001;20:4603-4617.

Domain	Description	Evalue	Bits	GA	Start	End
Macoilin	Transmembrane protein	0.0004	9	32.00	117	263
SCRL	Plant self-incompatibility response (SCRL) protein	5.1E-06	17	21.80	137	177
HLH	Helix-loop-helix DNA-binding domain	1.4E-11	35	20.70	166	213
NRBF2	Nuclear receptor-binding factor 2, autophagy regulator	0.00022	11	36.80	191	245
PPS_PS	Phosphopantothenate/pantothenate synthetase	0.0001	12	26.40	193	236
HAUS-augmin3	HAUS augmin-like complex subunit 3	0.00011	12	27.80	197	261
CENP-H	Centromere protein H (CENP-H)	0.0011	10	23.00	206	260
ZapB	Cell division protein ZapB	2.9E-05	15	31.20	206	262
DUF4201	Domain of unknown function (DUF4201)	2.7E-05	14	31.60	208	262
Cluap1	Clusterin-associated protein-1	6.3E-05	13	24.00	208	270
DUF3450	Protein of unknown function (DUF3450)	0.00039	10	26.90	208	261
APG6_N	Apg6 coiled-coil region	0.00011	13	45.00	209	258
TMF_DNA_bd	TATA element modulatory factor 1 DNA binding	2E-05	15	35.00	210	262
DivIC	Septum formation initiator	0.00092	9	24.00	210	244
DUF2205	Predicted coiled-coil protein (DUF2205)	0.00031	11	26.70	211	249
DUF5082	Domain of unknown function (DUF5082)	0.0006	10	33.70	211	262
YabA	Initiation control protein YabA	2.2E-05	15	30.00	215	260
DivIC	Septum formation initiator	0.13	2	24.00	234	260