c2pfam

AT3G23750.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2.7E-11 34 20.70 24 58
LRR_8 Leucine rich repeat 7.3E-13 38 27.00 86 143
LRR_4 Leucine Rich repeats (2 copies) 1.5E-05 15 27.00 86 118
LRR_1 Leucine Rich Repeat 0.85 1 20.60 87 106
LRR_5 BspA type Leucine rich repeat region (6 copies) 6.6E-06 16 27.70 87 190
LRR_6 Leucine Rich repeat 0.021 5 23.40 132 146
LRR_4 Leucine Rich repeats (2 copies) 5.4E-08 23 27.00 132 170
LRR_1 Leucine Rich Repeat 0.17 3 20.60 133 145
LRR_1 Leucine Rich Repeat 0.7 1 20.60 159 181
LRR_8 Leucine rich repeat 3.9E-09 26 27.00 159 202
LRR_4 Leucine Rich repeats (2 copies) 0.00017 12 27.00 183 216
LRR_1 Leucine Rich Repeat 0.0081 7 20.60 183 203
LRR_6 Leucine Rich repeat 0.027 5 23.40 183 196
LRR_6 Leucine Rich repeat 0.21 2 23.40 253 267
LRR_8 Leucine rich repeat 2.1E-05 14 27.00 253 289
LRR_4 Leucine Rich repeats (2 copies) 0.00054 10 27.00 255 289
LRR_1 Leucine Rich Repeat 0.72 1 20.60 258 274
LRRNT_2 Leucine rich repeat N-terminal domain 0.00032 11 20.70 321 357
LRR_4 Leucine Rich repeats (2 copies) 2.2E-05 15 27.00 362 399
LRR_8 Leucine rich repeat 2.3E-09 27 27.00 362 421
LRR_6 Leucine Rich repeat 0.0077 6 23.40 384 399
LRR_4 Leucine Rich repeats (2 copies) 8E-07 19 27.00 385 425
LRR_1 Leucine Rich Repeat 0.0016 9 20.60 386 405
LRR_6 Leucine Rich repeat 0.35 1 23.40 409 424
LRR_1 Leucine Rich Repeat 0.064 4 20.60 410 426
Syndecan Syndecan domain 6.3E-05 13 31.40 473 502
FeoB_associated FeoB-associated Cys-rich membrane protein 0.00078 10 27.00 479 504
Pkinase Protein kinase domain 0 156 20.40 579 851
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 163 23.10 581 852
PIP49_C Pancreatitis induced protein 49 C terminal 4.9E-05 13 28.10 632 728
Pkinase_fungal Fungal protein kinase 0.00018 10 24.10 692 754
APH Phosphotransferase enzyme family 4.6E-05 13 22.40 696 731

928

LRRNT_2
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_4
LRR_1
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_8
LRR_4
LRR_1
LRRNT_2
LRR_4
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
Syndecan
FeoB_associated
Pkinase
PK_Tyr_Ser-Thr
PIP49_C
Pkinase_fungal
APH

References:

PIP49_C
11281735 Cloning and expression of the mouse PIP49 (Pancreatitis Induced Protein 49) mRNA which encodes a new putative transmembrane protein activated in the pancreas with acute pancreatitis. Mol Cell Biol Res Commun. 2000;4:188-193.

Pkinase_fungal

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

FeoB_associated

Syndecan
9582338 Solution structure of a syndecan-4 cytoplasmic domain and its interaction with phosphatidylinositol 4,5-bisphosphate. J Biol Chem 1998;273:13022-13029.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_5

LRR_4

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2.7E-11	34	20.70	24	58
LRR_8	Leucine rich repeat	7.3E-13	38	27.00	86	143
LRR_4	Leucine Rich repeats (2 copies)	1.5E-05	15	27.00	86	118
LRR_1	Leucine Rich Repeat	0.85	1	20.60	87	106
LRR_5	BspA type Leucine rich repeat region (6 copies)	6.6E-06	16	27.70	87	190
LRR_6	Leucine Rich repeat	0.021	5	23.40	132	146
LRR_4	Leucine Rich repeats (2 copies)	5.4E-08	23	27.00	132	170
LRR_1	Leucine Rich Repeat	0.17	3	20.60	133	145
LRR_1	Leucine Rich Repeat	0.7	1	20.60	159	181
LRR_8	Leucine rich repeat	3.9E-09	26	27.00	159	202
LRR_4	Leucine Rich repeats (2 copies)	0.00017	12	27.00	183	216
LRR_1	Leucine Rich Repeat	0.0081	7	20.60	183	203
LRR_6	Leucine Rich repeat	0.027	5	23.40	183	196
LRR_6	Leucine Rich repeat	0.21	2	23.40	253	267
LRR_8	Leucine rich repeat	2.1E-05	14	27.00	253	289
LRR_4	Leucine Rich repeats (2 copies)	0.00054	10	27.00	255	289
LRR_1	Leucine Rich Repeat	0.72	1	20.60	258	274
LRRNT_2	Leucine rich repeat N-terminal domain	0.00032	11	20.70	321	357
LRR_4	Leucine Rich repeats (2 copies)	2.2E-05	15	27.00	362	399
LRR_8	Leucine rich repeat	2.3E-09	27	27.00	362	421
LRR_6	Leucine Rich repeat	0.0077	6	23.40	384	399
LRR_4	Leucine Rich repeats (2 copies)	8E-07	19	27.00	385	425
LRR_1	Leucine Rich Repeat	0.0016	9	20.60	386	405
LRR_6	Leucine Rich repeat	0.35	1	23.40	409	424
LRR_1	Leucine Rich Repeat	0.064	4	20.60	410	426
Syndecan	Syndecan domain	6.3E-05	13	31.40	473	502
FeoB_associated	FeoB-associated Cys-rich membrane protein	0.00078	10	27.00	479	504
Pkinase	Protein kinase domain	0	156	20.40	579	851
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	163	23.10	581	852
PIP49_C	Pancreatitis induced protein 49 C terminal	4.9E-05	13	28.10	632	728
Pkinase_fungal	Fungal protein kinase	0.00018	10	24.10	692	754
APH	Phosphotransferase enzyme family	4.6E-05	13	22.40	696	731