c2pfam

AT3G25100.1 :

Domain Description Evalue Bits GA Start End
CDC45 CDC45-like protein 0 519 26.70 28 594
HATPase_c_2 Histidine kinase-like ATPase domain 9.4E-05 12 27.40 136 189
NOA36 NOA36 protein 0.0022 7 25.00 137 192
GOLD_2 Golgi-dynamics membrane-trafficking 5.3E-05 13 28.40 149 218
RXT2_N RXT2-like, N-terminal 0.00047 10 21.10 157 191
FAM176 FAM176 family 0.00075 9 31.50 165 196
DUF2457 Protein of unknown function (DUF2457) 0.0016 7 30.00 165 191
CENP-B_dimeris Centromere protein B dimerisation domain 4.5E-08 23 21.80 165 211
Sigma70_ner Sigma-70, non-essential region 2.5E-05 14 24.50 166 221
PBP1_TM Transmembrane domain of transglycosylase PBP1 at N-terminal 0.0087 6 27.80 172 205

596

CDC45
HATPase_c_2
NOA36
GOLD_2
RXT2_N
FAM176
DUF2457
CENP-B_dimeris
Sigma70_ner
PBP1_TM

References:

CENP-B_dimeris
14522975 Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution. J Biol Chem. 2003;278:51454-51461.

NOA36

FAM176

Sigma70_ner
11931761 Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol Cell 2002;9:527-539.
8858155 Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. Cell 1996;87:127-136.

RXT2_N
10628851 Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Mol Gen Genet. 1999;262:683-702.
14562095 Global analysis of protein localization in budding yeast. Nature 2003;425:686-691.

PBP1_TM

DUF2457

HATPase_c_2

CDC45
9660782 The human homolog of Saccharomyces cerevisiae CDC45. J Biol Chem 1998;273:18205-18209.

GOLD_2

Domain	Description	Evalue	Bits	GA	Start	End
CDC45	CDC45-like protein	0	519	26.70	28	594
HATPase_c_2	Histidine kinase-like ATPase domain	9.4E-05	12	27.40	136	189
NOA36	NOA36 protein	0.0022	7	25.00	137	192
GOLD_2	Golgi-dynamics membrane-trafficking	5.3E-05	13	28.40	149	218
RXT2_N	RXT2-like, N-terminal	0.00047	10	21.10	157	191
FAM176	FAM176 family	0.00075	9	31.50	165	196
DUF2457	Protein of unknown function (DUF2457)	0.0016	7	30.00	165	191
CENP-B_dimeris	Centromere protein B dimerisation domain	4.5E-08	23	21.80	165	211
Sigma70_ner	Sigma-70, non-essential region	2.5E-05	14	24.50	166	221
PBP1_TM	Transmembrane domain of transglycosylase PBP1 at N-terminal	0.0087	6	27.80	172	205