c2pfam

AT3G25230.1 :

Domain Description Evalue Bits GA Start End
FKBP_N_2 BDBT FKBP like N-terminal 0.0011 9 27.00 37 143
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase 4.4E-37 117 21.10 51 142
FKBP_N_2 BDBT FKBP like N-terminal 0.15 3 27.00 154 182
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase 2.4E-20 63 21.10 169 259
FKBP_N_2 BDBT FKBP like N-terminal 0.7 0 27.00 209 229
FKBP_N_2 BDBT FKBP like N-terminal 5.8E-07 20 27.00 269 352
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase 4.9E-25 78 21.10 284 380
HemY_N HemY protein N-terminus 0.14 3 28.20 386 429
SYF2 SYF2 splicing factor 0.03 5 21.10 387 543
TPR_16 Tetratricopeptide repeat 0.22 3 32.70 406 428
TPR_2 Tetratricopeptide repeat 0.044 5 22.40 407 428
TPR_11 TPR repeat 0.00014 12 26.80 407 428
TPR_1 Tetratricopeptide repeat 0.14 3 20.40 407 428
TPR_6 Tetratricopeptide repeat 0.5 2 26.30 407 428
TPR_12 Tetratricopeptide repeat 0.66 1 30.10 413 428
TPR_8 Tetratricopeptide repeat 0.34 2 25.70 419 429
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.12 3 25.30 421 451
HemY_N HemY protein N-terminus 0.0053 7 28.20 448 492
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.00044 11 27.20 450 502
TPR_12 Tetratricopeptide repeat 2.3E-05 15 30.10 454 513
TPR_1 Tetratricopeptide repeat 1.7E-06 18 20.40 455 482
TPR_2 Tetratricopeptide repeat 0.00025 12 22.40 459 482
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.00051 11 25.30 459 483
TPR_14 Tetratricopeptide repeat 0.49 2 23.50 460 486
TPR_16 Tetratricopeptide repeat 1.1E-06 20 32.70 460 516
TPR_8 Tetratricopeptide repeat 0.0012 10 25.70 460 481
TPR_7 Tetratricopeptide repeat 0.0032 8 27.90 461 480
TPR_19 Tetratricopeptide repeat 4.2E-09 27 25.00 461 520
TPR_9 Tetratricopeptide repeat 5.7E-05 14 35.00 463 521
TPR_17 Tetratricopeptide repeat 3.7E-06 18 24.40 471 503
TPR_11 TPR repeat 0.002 8 26.80 474 496
TPR_1 Tetratricopeptide repeat 4.1E-11 33 20.40 483 516
TPR_8 Tetratricopeptide repeat 2.5E-08 24 25.70 484 516
TPR_2 Tetratricopeptide repeat 4.7E-09 26 22.40 484 516
TPR_14 Tetratricopeptide repeat 1.5E-05 16 23.50 484 521
TPR_7 Tetratricopeptide repeat 0.34 2 27.90 485 503
TPR_6 Tetratricopeptide repeat 0.026 6 26.30 485 502
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.0013 9 25.30 486 531
TPR_11 TPR repeat 0.024 5 26.80 507 516
TPR_17 Tetratricopeptide repeat 0.12 4 24.40 507 516

551

FKBP_N_2
FKBP_C
FKBP_N_2
FKBP_C
FKBP_N_2
FKBP_N_2
FKBP_C
HemY_N
SYF2
TPR_16
TPR_2
TPR_11
TPR_1
TPR_6
TPR_12
TPR_8
Fis1_TPR_C
HemY_N
ANAPC3
TPR_12
TPR_1
TPR_2
Fis1_TPR_C
TPR_14
TPR_16
TPR_8
TPR_7
TPR_19
TPR_9
TPR_17
TPR_11
TPR_1
TPR_8
TPR_2
TPR_14
TPR_7
TPR_6
Fis1_TPR_C
TPR_11
TPR_17

References:

TPR_7

TPR_6

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

Fis1_TPR_C

TPR_17

TPR_16

TPR_14

TPR_12

TPR_11

FKBP_C

SYF2
12384582 Mutations in genes of Saccharomyces cerevisiae encoding pre-mRNA splicing factors cause cell cycle arrest through activation of the spindle checkpoint. Nucleic Acids Res 2002;30:4361-4370.
11102353 Genetic and physical interactions between factors involved in both cell cycle progression and pre-mRNA splicing in Saccharomyces cerevisiae. Genetics 2000;156:1503-1517.

ANAPC3

FKBP_N_2

TPR_9

HemY_N
7928957 Bacillus subtilis HemY is a peripheral membrane protein essential for protoheme IX synthesis which can oxidize coproporphyrinogen III and protoporphyrinogen IX. J Bacteriol 1994;176:5962-5970.

TPR_19

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
FKBP_N_2	BDBT FKBP like N-terminal	0.0011	9	27.00	37	143
FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	4.4E-37	117	21.10	51	142
FKBP_N_2	BDBT FKBP like N-terminal	0.15	3	27.00	154	182
FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	2.4E-20	63	21.10	169	259
FKBP_N_2	BDBT FKBP like N-terminal	0.7	0	27.00	209	229
FKBP_N_2	BDBT FKBP like N-terminal	5.8E-07	20	27.00	269	352
FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	4.9E-25	78	21.10	284	380
HemY_N	HemY protein N-terminus	0.14	3	28.20	386	429
SYF2	SYF2 splicing factor	0.03	5	21.10	387	543
TPR_16	Tetratricopeptide repeat	0.22	3	32.70	406	428
TPR_2	Tetratricopeptide repeat	0.044	5	22.40	407	428
TPR_11	TPR repeat	0.00014	12	26.80	407	428
TPR_1	Tetratricopeptide repeat	0.14	3	20.40	407	428
TPR_6	Tetratricopeptide repeat	0.5	2	26.30	407	428
TPR_12	Tetratricopeptide repeat	0.66	1	30.10	413	428
TPR_8	Tetratricopeptide repeat	0.34	2	25.70	419	429
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.12	3	25.30	421	451
HemY_N	HemY protein N-terminus	0.0053	7	28.20	448	492
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.00044	11	27.20	450	502
TPR_12	Tetratricopeptide repeat	2.3E-05	15	30.10	454	513
TPR_1	Tetratricopeptide repeat	1.7E-06	18	20.40	455	482
TPR_2	Tetratricopeptide repeat	0.00025	12	22.40	459	482
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.00051	11	25.30	459	483
TPR_14	Tetratricopeptide repeat	0.49	2	23.50	460	486
TPR_16	Tetratricopeptide repeat	1.1E-06	20	32.70	460	516
TPR_8	Tetratricopeptide repeat	0.0012	10	25.70	460	481
TPR_7	Tetratricopeptide repeat	0.0032	8	27.90	461	480
TPR_19	Tetratricopeptide repeat	4.2E-09	27	25.00	461	520
TPR_9	Tetratricopeptide repeat	5.7E-05	14	35.00	463	521
TPR_17	Tetratricopeptide repeat	3.7E-06	18	24.40	471	503
TPR_11	TPR repeat	0.002	8	26.80	474	496
TPR_1	Tetratricopeptide repeat	4.1E-11	33	20.40	483	516
TPR_8	Tetratricopeptide repeat	2.5E-08	24	25.70	484	516
TPR_2	Tetratricopeptide repeat	4.7E-09	26	22.40	484	516
TPR_14	Tetratricopeptide repeat	1.5E-05	16	23.50	484	521
TPR_7	Tetratricopeptide repeat	0.34	2	27.90	485	503
TPR_6	Tetratricopeptide repeat	0.026	6	26.30	485	502
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.0013	9	25.30	486	531
TPR_11	TPR repeat	0.024	5	26.80	507	516
TPR_17	Tetratricopeptide repeat	0.12	4	24.40	507	516