c2pfam

AT3G27120.1 :

Domain Description Evalue Bits GA Start End
AAA_25 AAA domain 0.00021 11 27.00 427 452
TIP49 TIP49 C-terminus 6.7E-07 19 23.80 431 487
AAA_16 AAA ATPase domain 3.3E-05 14 32.60 434 532
ABC_tran ABC transporter 0.00025 12 23.10 434 463
IstB_IS21 IstB-like ATP binding protein 8.3E-05 12 24.10 437 473
AAA_22 AAA domain 8.8E-06 16 27.00 438 477
Mg_chelatase Magnesium chelatase, subunit ChlI 3.2E-05 13 20.30 438 457
AAA_14 AAA domain 7.2E-05 13 27.00 438 507
RuvB_N Holliday junction DNA helicase ruvB N-terminus 1.4E-06 18 20.00 439 508
AAA ATPase family associated with various cellular activities (AAA) 0 132 20.80 439 569
AAA_5 AAA domain (dynein-related subfamily) 1.1E-07 22 20.80 439 560
AAA_2 AAA domain (Cdc48 subfamily) 1.1E-05 16 20.60 440 516
AAA_lid_3 AAA+ lid domain 5.9E-10 29 27.20 601 642
Vps4_C Vps4 C terminal oligomerisation domain 1.7E-11 34 21.30 643 676

680

AAA_25
TIP49
AAA_16
ABC_tran
IstB_IS21
AAA_22
Mg_chelatase
AAA_14
RuvB_N
AAA
AAA_5
AAA_2
AAA_lid_3
Vps4_C

References:

IstB_IS21

AAA_16

AAA_14

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

Vps4_C
16704411 The beta domain is required for Vps4p oligomerization into a functionally active ATPase. FEBS J. 2006;273:2357-2373.

AAA_lid_3

RuvB_N
12423347 The RuvABC resolvasome. Eur J Biochem 2002;269:5492-5501.

Mg_chelatase
9359397 Mechanism and regulation of Mg-chelatase. Biochem J 1997;327:321-333.
9457877 Reconstitution of an active magnesium chelatase enzyme complex from the bchI, -D, and -H gene products of the green sulfur bacterium Chlorobium vibrioforme expressed in Escherichia coli. J Bacteriol 1998;180:699-704.

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_2
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_25

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_22

TIP49
12464178 Reptin and pontin antagonistically regulate heart growth in zebrafish embryos. Cell 2002;111:661-672.
10902922 Chromosome mapping and expression of human tip49 family genes. DNA Seq 2000;11:145-148.

Domain	Description	Evalue	Bits	GA	Start	End
AAA_25	AAA domain	0.00021	11	27.00	427	452
TIP49	TIP49 C-terminus	6.7E-07	19	23.80	431	487
AAA_16	AAA ATPase domain	3.3E-05	14	32.60	434	532
ABC_tran	ABC transporter	0.00025	12	23.10	434	463
IstB_IS21	IstB-like ATP binding protein	8.3E-05	12	24.10	437	473
AAA_22	AAA domain	8.8E-06	16	27.00	438	477
Mg_chelatase	Magnesium chelatase, subunit ChlI	3.2E-05	13	20.30	438	457
AAA_14	AAA domain	7.2E-05	13	27.00	438	507
RuvB_N	Holliday junction DNA helicase ruvB N-terminus	1.4E-06	18	20.00	439	508
AAA	ATPase family associated with various cellular activities (AAA)	0	132	20.80	439	569
AAA_5	AAA domain (dynein-related subfamily)	1.1E-07	22	20.80	439	560
AAA_2	AAA domain (Cdc48 subfamily)	1.1E-05	16	20.60	440	516
AAA_lid_3	AAA+ lid domain	5.9E-10	29	27.20	601	642
Vps4_C	Vps4 C terminal oligomerisation domain	1.7E-11	34	21.30	643	676