c2pfam

AT3G27640.1 :

Domain Description Evalue Bits GA Start End
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.032 2 29.50 68 158
WD40 WD domain, G-beta repeat 0.0037 7 21.00 75 100
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00021 10 22.90 82 116
WD40_3 WD domain, G-beta repeat 0.31 0 27.00 88 106
Nup160 Nucleoporin Nup120/160 1.4E-07 19 19.20 95 164
WD40 WD domain, G-beta repeat 3.2E-06 17 21.00 124 156
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.016 4 22.90 130 165
WD40_3 WD domain, G-beta repeat 0.22 0 27.00 138 166
WD40 WD domain, G-beta repeat 1.4E-07 21 21.00 161 199
Nup160 Nucleoporin Nup120/160 0.0026 5 19.20 179 276
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.03 2 29.50 238 269
WD40 WD domain, G-beta repeat 0.0081 6 21.00 239 267
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.0066 5 22.90 287 320
WD40 WD domain, G-beta repeat 0.00015 11 21.00 291 320
WD40_3 WD domain, G-beta repeat 0.0011 8 27.00 292 322
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.09 0 29.50 294 320
WD40 WD domain, G-beta repeat 4.9E-06 16 21.00 330 365
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.0015 6 29.50 337 369
WD40 WD domain, G-beta repeat 4.8E-09 25 21.00 376 410
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.006 5 22.90 376 422
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.21 -1 29.50 395 412
Nup160 Nucleoporin Nup120/160 0.00015 9 19.20 396 458

535

Ge1_WD40
WD40
ANAPC4_WD40
WD40_3
Nup160
WD40
ANAPC4_WD40
WD40_3
WD40
Nup160
Ge1_WD40
WD40
ANAPC4_WD40
WD40
WD40_3
Ge1_WD40
WD40
Ge1_WD40
WD40
ANAPC4_WD40
Ge1_WD40
Nup160

References:

ANAPC4_WD40

Ge1_WD40

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40_3

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Domain	Description	Evalue	Bits	GA	Start	End
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.032	2	29.50	68	158
WD40	WD domain, G-beta repeat	0.0037	7	21.00	75	100
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00021	10	22.90	82	116
WD40_3	WD domain, G-beta repeat	0.31	0	27.00	88	106
Nup160	Nucleoporin Nup120/160	1.4E-07	19	19.20	95	164
WD40	WD domain, G-beta repeat	3.2E-06	17	21.00	124	156
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.016	4	22.90	130	165
WD40_3	WD domain, G-beta repeat	0.22	0	27.00	138	166
WD40	WD domain, G-beta repeat	1.4E-07	21	21.00	161	199
Nup160	Nucleoporin Nup120/160	0.0026	5	19.20	179	276
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.03	2	29.50	238	269
WD40	WD domain, G-beta repeat	0.0081	6	21.00	239	267
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.0066	5	22.90	287	320
WD40	WD domain, G-beta repeat	0.00015	11	21.00	291	320
WD40_3	WD domain, G-beta repeat	0.0011	8	27.00	292	322
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.09	0	29.50	294	320
WD40	WD domain, G-beta repeat	4.9E-06	16	21.00	330	365
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.0015	6	29.50	337	369
WD40	WD domain, G-beta repeat	4.8E-09	25	21.00	376	410
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.006	5	22.90	376	422
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.21	-1	29.50	395	412
Nup160	Nucleoporin Nup120/160	0.00015	9	19.20	396	458