AT3G28210.1 :
Domain
Description
Evalue
Bits
GA
Start
End
Transp_Tc5_C
Tc5 transposase C-terminal domain
0.0012
8
20.60
14
50
zf-AN1
AN1-like Zinc finger
5E-16
47
23.50
16
53
IBR
IBR domain
0.049
2
23.60
18
44
zf-C5HC2
C5HC2 zinc finger
0.00094
8
21.00
29
55
IBR
IBR domain
0.46
-1
23.60
53
67
IBR
IBR domain
1.6E-05
13
23.60
97
134
Transp_Tc5_C
Tc5 transposase C-terminal domain
0.00034
9
20.60
97
139
zf-AN1
AN1-like Zinc finger
2.7E-14
41
23.50
103
142
zf-C5HC2
C5HC2 zinc finger
4.4E-05
12
21.00
113
154
186
Transp_Tc5_C
zf-AN1
IBR
zf-C5HC2
IBR
IBR
Transp_Tc5_C
zf-AN1
zf-C5HC2
References:
Transp_Tc5_C
8088523
The Tc5 family of transposable elements in Caenorhabditis elegans.
Genetics 1994;137:771-781.
zf-AN1
8390387
Two related localized mRNAs from Xenopus laevis encode ubiquitin-like fusion proteins.
Gene 1993;128:181-188.
zf-C5HC2
11165500
JmjC: cupin metalloenzyme-like domains in jumonji, hairless and phospholipase A2beta.
Trends Biochem Sci 2001;26:7-9.
IBR
10366851
A novel transactivation domain in parkin.
Trends Biochem Sci 1999;24:229-231.
10422847
TRIADs: a new class of proteins with a novel cysteine-rich signature.
Protein Sci 1999;8:1557-1561.
15152079
Parkin and relatives: the RBR family of ubiquitin ligases.
Physiol Genomics 2004;17:253-263.
12446796
Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily.
Mol Biol Evol 2002;19:2039-2050.