c2pfam

AT1G15290.1 :

Domain Description Evalue Bits GA Start End
CLU_N Mitochondrial function, CLU-N-term 7.2E-08 22 25.00 51 121
CLU Clustered mitochondria 7.6E-05 12 24.00 310 360
eIF3_p135 Translation initiation factor eIF3 subunit 135 2.1E-21 66 22.00 677 757
eIF3_p135 Translation initiation factor eIF3 subunit 135 2E-06 18 22.00 777 820
TPR_8 Tetratricopeptide repeat 0.99 0 25.70 855 874
TPR_2 Tetratricopeptide repeat 0.52 1 22.40 857 875
TPR_12 Tetratricopeptide repeat 4.1E-08 23 30.10 859 909
TPR_12 Tetratricopeptide repeat 3.2E-17 52 30.10 889 959
TPR_1 Tetratricopeptide repeat 0.00029 10 20.40 890 921
TPR_2 Tetratricopeptide repeat 1.3E-05 15 22.40 892 921
TPR_10 Tetratricopeptide repeat 5.2E-10 29 27.50 892 930
TPR_8 Tetratricopeptide repeat 0.00025 11 25.70 892 921
TPR_10 Tetratricopeptide repeat 0.16 2 27.50 931 959
TPR_8 Tetratricopeptide repeat 0.043 4 25.70 933 959
TPR_2 Tetratricopeptide repeat 0.001 9 22.40 937 959
TPR_1 Tetratricopeptide repeat 0.029 4 20.40 942 959
TPR_9 Tetratricopeptide repeat 2.8E-05 14 35.00 942 1003
TPR_12 Tetratricopeptide repeat 3.3E-12 36 30.10 973 1047
TPR_10 Tetratricopeptide repeat 3.3E-09 26 27.50 973 1013
TPR_1 Tetratricopeptide repeat 0.21 1 20.40 974 1003
TPR_2 Tetratricopeptide repeat 0.13 2 22.40 976 1005
TPR_10 Tetratricopeptide repeat 0.0055 6 27.50 1015 1053
DUF5681 Family of unknown function (DUF5681) 0.0015 9 27.50 1206 1245
PAM2 Ataxin-2 C-terminal region 2.2E-05 14 20.00 1471 1480

1608

CLU_N
CLU
eIF3_p135
eIF3_p135
TPR_8
TPR_2
TPR_12
TPR_12
TPR_1
TPR_2
TPR_10
TPR_8
TPR_10
TPR_8
TPR_2
TPR_1
TPR_9
TPR_12
TPR_10
TPR_1
TPR_2
TPR_10
DUF5681
PAM2

References:

CLU_N

eIF3_p135

DUF5681

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

CLU

PAM2
15003521 Survey on the PABC recognition motif PAM2. Biochem Biophys Res Commun 2004;316:129-138.

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_12

TPR_10

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
CLU_N	Mitochondrial function, CLU-N-term	7.2E-08	22	25.00	51	121
CLU	Clustered mitochondria	7.6E-05	12	24.00	310	360
eIF3_p135	Translation initiation factor eIF3 subunit 135	2.1E-21	66	22.00	677	757
eIF3_p135	Translation initiation factor eIF3 subunit 135	2E-06	18	22.00	777	820
TPR_8	Tetratricopeptide repeat	0.99	0	25.70	855	874
TPR_2	Tetratricopeptide repeat	0.52	1	22.40	857	875
TPR_12	Tetratricopeptide repeat	4.1E-08	23	30.10	859	909
TPR_12	Tetratricopeptide repeat	3.2E-17	52	30.10	889	959
TPR_1	Tetratricopeptide repeat	0.00029	10	20.40	890	921
TPR_2	Tetratricopeptide repeat	1.3E-05	15	22.40	892	921
TPR_10	Tetratricopeptide repeat	5.2E-10	29	27.50	892	930
TPR_8	Tetratricopeptide repeat	0.00025	11	25.70	892	921
TPR_10	Tetratricopeptide repeat	0.16	2	27.50	931	959
TPR_8	Tetratricopeptide repeat	0.043	4	25.70	933	959
TPR_2	Tetratricopeptide repeat	0.001	9	22.40	937	959
TPR_1	Tetratricopeptide repeat	0.029	4	20.40	942	959
TPR_9	Tetratricopeptide repeat	2.8E-05	14	35.00	942	1003
TPR_12	Tetratricopeptide repeat	3.3E-12	36	30.10	973	1047
TPR_10	Tetratricopeptide repeat	3.3E-09	26	27.50	973	1013
TPR_1	Tetratricopeptide repeat	0.21	1	20.40	974	1003
TPR_2	Tetratricopeptide repeat	0.13	2	22.40	976	1005
TPR_10	Tetratricopeptide repeat	0.0055	6	27.50	1015	1053
DUF5681	Family of unknown function (DUF5681)	0.0015	9	27.50	1206	1245
PAM2	Ataxin-2 C-terminal region	2.2E-05	14	20.00	1471	1480