c2pfam

AT3G30260.1 :

Domain Description Evalue Bits GA Start End
CCDC-167 Coiled-coil domain-containing protein 167 0.0082 6 27.00 5 36
SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain) 1.2E-28 88 20.40 10 57
K-box K-box region 9.7E-26 79 20.60 87 171
CCDC-167 Coiled-coil domain-containing protein 167 0.055 3 27.00 89 115
HAP1_N HAP1 N-terminal conserved region 7E-07 18 25.00 91 181
GrpE GrpE 0.0025 7 25.80 95 138
Mer2 Mer2 2.5E-05 13 23.40 96 176
DUF334 Domain of unknown function (DUF334) 0.0026 6 19.60 101 140
CCDC-167 Coiled-coil domain-containing protein 167 0.012 5 27.00 125 170
DUF334 Domain of unknown function (DUF334) 0.024 3 19.60 141 182
GrpE GrpE 0.013 4 25.80 148 180
DUF5395 Family of unknown function (DUF5395) 0.0029 7 25.00 152 182
DUF5395 Family of unknown function (DUF5395) 0.22 1 25.00 237 246

249

CCDC-167
SRF-TF
K-box
CCDC-167
HAP1_N
GrpE
Mer2
DUF334
CCDC-167
DUF334
GrpE
DUF5395
DUF5395

References:

SRF-TF

Mer2
16783010 S. cerevisiae Mer2, Mei4 and Rec114 Form a Complex Required for Meiotic Double-Strand Break Formation. Genetics. 2006; [Epub ahead of print]

CCDC-167

DUF334

DUF5395

HAP1_N
7477378 A huntingtin-associated protein enriched in brain with implications for pathology. Nature 1995;378:398-402.
9599014 HAP1-huntingtin interactions do not contribute to the molecular pathology in Huntington's disease transgenic mice. FEBS Lett 1998;426:229-232.
9285789 Huntingtin-associated protein 1 (HAP1) binds to a Trio-like polypeptide, with a rac1 guanine nucleotide exchange factor domain. Hum Mol Genet 1997;6:1519-1525.
11161814 Cloning and characterization of three novel genes, ALS2CR1, ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral sclerosis (ALS2) critical region at chromosome 2q33-q34: candidate genes for ALS2. Genomics 2001;71:200-213.

GrpE
9103205 Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK. Science 1997;276:431-435.

K-box
7958839 Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA. Genes Dev 1994;8:1548-1560.
2031185 Predicting coiled coils from protein sequences. Science 1991;252:1162-1164.

Domain	Description	Evalue	Bits	GA	Start	End
CCDC-167	Coiled-coil domain-containing protein 167	0.0082	6	27.00	5	36
SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	1.2E-28	88	20.40	10	57
K-box	K-box region	9.7E-26	79	20.60	87	171
CCDC-167	Coiled-coil domain-containing protein 167	0.055	3	27.00	89	115
HAP1_N	HAP1 N-terminal conserved region	7E-07	18	25.00	91	181
GrpE	GrpE	0.0025	7	25.80	95	138
Mer2	Mer2	2.5E-05	13	23.40	96	176
DUF334	Domain of unknown function (DUF334)	0.0026	6	19.60	101	140
CCDC-167	Coiled-coil domain-containing protein 167	0.012	5	27.00	125	170
DUF334	Domain of unknown function (DUF334)	0.024	3	19.60	141	182
GrpE	GrpE	0.013	4	25.80	148	180
DUF5395	Family of unknown function (DUF5395)	0.0029	7	25.00	152	182
DUF5395	Family of unknown function (DUF5395)	0.22	1	25.00	237	246