c2pfam

AT3G44750.1 :

Domain Description Evalue Bits GA Start End
NPL Nucleoplasmin-like domain 7E-15 45 23.40 3 92
YL1 YL1 nuclear protein 9.7E-09 25 25.60 100 215
Nop14 Nop14-like family 0.00017 9 34.90 104 199
Hid1 High-temperature-induced dauer-formation protein 0.00024 9 22.50 142 226
U71 Tegument protein UL11 homolog 0.00013 11 25.00 215 228
zf-C2H2 Zinc finger, C2H2 type 0.00036 10 20.80 219 241
zf-C2H2_6 C2H2-type zinc finger 3.7E-08 23 25.00 220 242
zf-met Zinc-finger of C2H2 type 2.8E-06 17 21.20 220 238
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 2.7E-05 14 22.60 220 237

245

NPL
YL1
Nop14
Hid1
U71
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz

References:

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

YL1
7702631 Molecular cloning of a novel human cDNA on chromosome 1q21 and its mouse homolog encoding a nuclear protein with DNA-binding ability. Biochem Biophys Res Commun 1995;208:999-1007.

NPL

zf-C2H2_6

Nop14
11694595 Novel stress-responsive genes EMG1 and NOP14 encode conserved, interacting proteins required for 40S ribosome biogenesis. Mol Biol Cell 2001;12:3644-3657.

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

zf-met

Hid1

U71

Domain	Description	Evalue	Bits	GA	Start	End
NPL	Nucleoplasmin-like domain	7E-15	45	23.40	3	92
YL1	YL1 nuclear protein	9.7E-09	25	25.60	100	215
Nop14	Nop14-like family	0.00017	9	34.90	104	199
Hid1	High-temperature-induced dauer-formation protein	0.00024	9	22.50	142	226
U71	Tegument protein UL11 homolog	0.00013	11	25.00	215	228
zf-C2H2	Zinc finger, C2H2 type	0.00036	10	20.80	219	241
zf-C2H2_6	C2H2-type zinc finger	3.7E-08	23	25.00	220	242
zf-met	Zinc-finger of C2H2 type	2.8E-06	17	21.20	220	238
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	2.7E-05	14	22.60	220	237