c2pfam

AT3G46440.1 :

Domain Description Evalue Bits GA Start End
RmlD_sub_bind RmlD substrate binding domain 1.2E-09 27 19.80 29 284
Epimerase NAD dependent epimerase/dehydratase family 0 154 20.60 31 265
Polysacc_synt_2 Polysaccharide biosynthesis protein 2.1E-10 29 20.20 31 140
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 0 186 27.00 32 326
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 3E-14 42 20.00 32 183
NAD_binding_4 Male sterility protein 2.8E-05 12 20.10 33 58
Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding domain 0.0001 12 25.10 36 86
NAD_binding_4 Male sterility protein 4.9E-10 28 20.10 83 204
Polysacc_synt_2 Polysaccharide biosynthesis protein 9.9E-06 14 20.20 171 287

341

RmlD_sub_bind
Epimerase
Polysacc_synt_2
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Sacchrp_dh_NADP
NAD_binding_4
Polysacc_synt_2

References:

Sacchrp_dh_NADP

GDP_Man_Dehyd

NAD_binding_4
9351246 The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes. Plant J 1997;12:615-623.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

3Beta_HSD
1562516 Structure and tissue-specific expression of 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase genes in human and rat classical and peripheral steroidogenic tissues. J Steroid Biochem Mol Biol 1992;41:421-435.

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

RmlD_sub_bind
12057193 Variation on a Theme of SDR. dTDP-6-Deoxy-L- lyxo-4-Hexulose Reductase (RmlD) Shows a New Mg(2+)-Dependent Dimerization Mode. Structure (Camb) 2002;10:773-786.
10802738 RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase. Nat Struct Biol 2000;7:398-402.

Domain	Description	Evalue	Bits	GA	Start	End
RmlD_sub_bind	RmlD substrate binding domain	1.2E-09	27	19.80	29	284
Epimerase	NAD dependent epimerase/dehydratase family	0	154	20.60	31	265
Polysacc_synt_2	Polysaccharide biosynthesis protein	2.1E-10	29	20.20	31	140
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	0	186	27.00	32	326
3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	3E-14	42	20.00	32	183
NAD_binding_4	Male sterility protein	2.8E-05	12	20.10	33	58
Sacchrp_dh_NADP	Saccharopine dehydrogenase NADP binding domain	0.0001	12	25.10	36	86
NAD_binding_4	Male sterility protein	4.9E-10	28	20.10	83	204
Polysacc_synt_2	Polysaccharide biosynthesis protein	9.9E-06	14	20.20	171	287