c2pfam

AT3G47060.1 :

Domain Description Evalue Bits GA Start End
FtsH_ext FtsH Extracellular 1.8E-09 28 25.50 144 260
DUF815 Protein of unknown function (DUF815) 0.00029 10 20.10 321 382
AAA_16 AAA ATPase domain 3.1E-06 18 32.60 356 412
RuvB_N Holliday junction DNA helicase ruvB N-terminus 1.7E-06 18 20.00 358 434
TIP49 TIP49 C-terminus 3.2E-06 17 23.80 358 395
Mg_chelatase Magnesium chelatase, subunit ChlI 0.00027 10 20.30 360 379
AAA_5 AAA domain (dynein-related subfamily) 1.3E-06 19 20.80 360 483
AAA_22 AAA domain 7.6E-05 13 27.00 361 406
AAA_2 AAA domain (Cdc48 subfamily) 7E-07 20 20.60 361 437
AAA ATPase family associated with various cellular activities (AAA) 0 148 20.80 361 494
AAA_18 AAA domain 0.00063 10 29.40 361 381
AAA_14 AAA domain 4E-05 14 27.00 361 470
AAA_33 AAA domain 2.8E-05 14 27.00 361 388
AAA_17 AAA domain 9.3E-05 13 27.00 364 431
AAA_lid_3 AAA+ lid domain 7.7E-15 45 27.20 519 561
DUF815 Protein of unknown function (DUF815) 0.24 1 20.10 556 596
Peptidase_M41 Peptidase family M41 0 126 20.60 580 772
DUF815 Protein of unknown function (DUF815) 0.86 -1 20.10 611 647

802

FtsH_ext
DUF815
AAA_16
RuvB_N
TIP49
Mg_chelatase
AAA_5
AAA_22
AAA_2
AAA
AAA_18
AAA_14
AAA_33
AAA_17
AAA_lid_3
DUF815
Peptidase_M41
DUF815

References:

DUF815

AAA_16

AAA_14

AAA_17

AAA_lid_3

FtsH_ext
12667449 Lack of a robust unfoldase activity confers a unique level of substrate specificity to the universal AAA protease FtsH. Mol Cell 2003;11:659-669.
12732516 The ftsH gene of the wine bacterium Oenococcus oeni is involved in protection against environmental stress. Appl Environ Microbiol 2003;69:2512-2520.

RuvB_N
12423347 The RuvABC resolvasome. Eur J Biochem 2002;269:5492-5501.

Peptidase_M41

Mg_chelatase
9359397 Mechanism and regulation of Mg-chelatase. Biochem J 1997;327:321-333.
9457877 Reconstitution of an active magnesium chelatase enzyme complex from the bchI, -D, and -H gene products of the green sulfur bacterium Chlorobium vibrioforme expressed in Escherichia coli. J Bacteriol 1998;180:699-704.

AAA_33

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_2
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_22

TIP49
12464178 Reptin and pontin antagonistically regulate heart growth in zebrafish embryos. Cell 2002;111:661-672.
10902922 Chromosome mapping and expression of human tip49 family genes. DNA Seq 2000;11:145-148.

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
FtsH_ext	FtsH Extracellular	1.8E-09	28	25.50	144	260
DUF815	Protein of unknown function (DUF815)	0.00029	10	20.10	321	382
AAA_16	AAA ATPase domain	3.1E-06	18	32.60	356	412
RuvB_N	Holliday junction DNA helicase ruvB N-terminus	1.7E-06	18	20.00	358	434
TIP49	TIP49 C-terminus	3.2E-06	17	23.80	358	395
Mg_chelatase	Magnesium chelatase, subunit ChlI	0.00027	10	20.30	360	379
AAA_5	AAA domain (dynein-related subfamily)	1.3E-06	19	20.80	360	483
AAA_22	AAA domain	7.6E-05	13	27.00	361	406
AAA_2	AAA domain (Cdc48 subfamily)	7E-07	20	20.60	361	437
AAA	ATPase family associated with various cellular activities (AAA)	0	148	20.80	361	494
AAA_18	AAA domain	0.00063	10	29.40	361	381
AAA_14	AAA domain	4E-05	14	27.00	361	470
AAA_33	AAA domain	2.8E-05	14	27.00	361	388
AAA_17	AAA domain	9.3E-05	13	27.00	364	431
AAA_lid_3	AAA+ lid domain	7.7E-15	45	27.20	519	561
DUF815	Protein of unknown function (DUF815)	0.24	1	20.10	556	596
Peptidase_M41	Peptidase family M41	0	126	20.60	580	772
DUF815	Protein of unknown function (DUF815)	0.86	-1	20.10	611	647