c2pfam

AT3G47110.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 8.8E-14 41 20.70 38 76
LRR_4 Leucine Rich repeats (2 copies) 0.013 5 27.00 86 115
LRR_6 Leucine Rich repeat 0.11 2 23.40 105 115
LRR_1 Leucine Rich Repeat 0.023 5 20.60 107 127
LRR_8 Leucine rich repeat 2.3E-10 30 27.00 107 165
LRR_4 Leucine Rich repeats (2 copies) 1.8E-06 18 27.00 130 164
LRR_1 Leucine Rich Repeat 0.0069 7 20.60 130 152
LRR_6 Leucine Rich repeat 0.074 3 23.40 130 143
Suppressor_P21 RNA silencing suppressor P21 0.0023 8 28.90 143 168
LRR_6 Leucine Rich repeat 0.0063 6 23.40 151 165
LRR_1 Leucine Rich Repeat 0.0031 8 20.60 154 176
LRR_8 Leucine rich repeat 7.5E-08 22 27.00 173 213
LRR_4 Leucine Rich repeats (2 copies) 4E-05 13 27.00 178 213
LRR_1 Leucine Rich Repeat 0.0094 6 20.60 178 200
LRR_8 Leucine rich repeat 0.00018 11 27.00 233 284
LRR_4 Leucine Rich repeats (2 copies) 0.0002 11 27.00 250 289
LRR_1 Leucine Rich Repeat 0.28 2 20.60 251 272
LRR_8 Leucine rich repeat 3.5E-08 23 27.00 254 310
LRR_1 Leucine Rich Repeat 0.22 2 20.60 275 296
Suppressor_P21 RNA silencing suppressor P21 0.45 0 28.90 293 308
LRR_6 Leucine Rich repeat 0.24 1 23.40 298 313
LRR_1 Leucine Rich Repeat 0.013 6 20.60 299 321
LRR_8 Leucine rich repeat 6.2E-06 15 27.00 299 364
LRR_4 Leucine Rich repeats (2 copies) 0.0022 8 27.00 299 335
LRR_4 Leucine Rich repeats (2 copies) 0.0086 6 27.00 341 364
LRR_8 Leucine rich repeat 0.0011 8 27.00 347 389
LRR_6 Leucine Rich repeat 0.0038 7 23.40 351 366
LRR_1 Leucine Rich Repeat 0.066 4 20.60 353 369
DUF5837 Family of unknown function (DUF5837) 0.61 0 25.00 366 377
LRR_6 Leucine Rich repeat 0.014 5 23.40 376 391
LRR_4 Leucine Rich repeats (2 copies) 3.5E-08 23 27.00 377 417
LRR_8 Leucine rich repeat 7.3E-09 25 27.00 378 437
LRR_1 Leucine Rich Repeat 0.051 4 20.60 378 400
LRR_1 Leucine Rich Repeat 0.0011 9 20.60 402 424
LRR_6 Leucine Rich repeat 0.11 2 23.40 402 415
DUF5837 Family of unknown function (DUF5837) 0.0026 7 25.00 414 443
LRR_4 Leucine Rich repeats (2 copies) 3.5E-05 14 27.00 426 462
LRR_8 Leucine rich repeat 2E-09 27 27.00 450 509
LRR_1 Leucine Rich Repeat 0.02 5 20.60 451 472
LRR_6 Leucine Rich repeat 0.71 0 23.40 471 487
LRR_4 Leucine Rich repeats (2 copies) 0.00071 10 27.00 478 513
LRR_6 Leucine Rich repeat 0.22 1 23.40 497 508
LRR_8 Leucine rich repeat 8.2E-06 15 27.00 520 556
LRR_6 Leucine Rich repeat 0.021 5 23.40 522 535
LRR_1 Leucine Rich Repeat 0.046 4 20.60 525 544
LRR_4 Leucine Rich repeats (2 copies) 0.0045 7 27.00 526 564
LRR_8 Leucine rich repeat 8.9E-07 18 27.00 565 603
LRR_4 Leucine Rich repeats (2 copies) 1.6E-06 18 27.00 568 603
LRR_6 Leucine Rich repeat 0.021 5 23.40 569 582
LRR_1 Leucine Rich Repeat 0.0085 7 20.60 570 587
LRR_6 Leucine Rich repeat 0.11 2 23.40 593 606
Pkinase Protein kinase domain 3.2E-38 121 20.40 721 942
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 3E-37 118 23.10 722 941

1025

LRRNT_2
LRR_4
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
Suppressor_P21
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_8
LRR_1
Suppressor_P21
LRR_6
LRR_1
LRR_8
LRR_4
LRR_4
LRR_8
LRR_6
LRR_1
DUF5837
LRR_6
LRR_4
LRR_8
LRR_1
LRR_1
LRR_6
DUF5837
LRR_4
LRR_8
LRR_1
LRR_6
LRR_4
LRR_6
LRR_8
LRR_6
LRR_1
LRR_4
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
Pkinase
PK_Tyr_Ser-Thr

References:

Suppressor_P21
16154094 RNA silencing suppressor p21 of Beet yellows virus forms an RNA binding octameric ring structure. Structure. 2005;13:1375-1384.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

DUF5837

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_6

LRR_4

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	8.8E-14	41	20.70	38	76
LRR_4	Leucine Rich repeats (2 copies)	0.013	5	27.00	86	115
LRR_6	Leucine Rich repeat	0.11	2	23.40	105	115
LRR_1	Leucine Rich Repeat	0.023	5	20.60	107	127
LRR_8	Leucine rich repeat	2.3E-10	30	27.00	107	165
LRR_4	Leucine Rich repeats (2 copies)	1.8E-06	18	27.00	130	164
LRR_1	Leucine Rich Repeat	0.0069	7	20.60	130	152
LRR_6	Leucine Rich repeat	0.074	3	23.40	130	143
Suppressor_P21	RNA silencing suppressor P21	0.0023	8	28.90	143	168
LRR_6	Leucine Rich repeat	0.0063	6	23.40	151	165
LRR_1	Leucine Rich Repeat	0.0031	8	20.60	154	176
LRR_8	Leucine rich repeat	7.5E-08	22	27.00	173	213
LRR_4	Leucine Rich repeats (2 copies)	4E-05	13	27.00	178	213
LRR_1	Leucine Rich Repeat	0.0094	6	20.60	178	200
LRR_8	Leucine rich repeat	0.00018	11	27.00	233	284
LRR_4	Leucine Rich repeats (2 copies)	0.0002	11	27.00	250	289
LRR_1	Leucine Rich Repeat	0.28	2	20.60	251	272
LRR_8	Leucine rich repeat	3.5E-08	23	27.00	254	310
LRR_1	Leucine Rich Repeat	0.22	2	20.60	275	296
Suppressor_P21	RNA silencing suppressor P21	0.45	0	28.90	293	308
LRR_6	Leucine Rich repeat	0.24	1	23.40	298	313
LRR_1	Leucine Rich Repeat	0.013	6	20.60	299	321
LRR_8	Leucine rich repeat	6.2E-06	15	27.00	299	364
LRR_4	Leucine Rich repeats (2 copies)	0.0022	8	27.00	299	335
LRR_4	Leucine Rich repeats (2 copies)	0.0086	6	27.00	341	364
LRR_8	Leucine rich repeat	0.0011	8	27.00	347	389
LRR_6	Leucine Rich repeat	0.0038	7	23.40	351	366
LRR_1	Leucine Rich Repeat	0.066	4	20.60	353	369
DUF5837	Family of unknown function (DUF5837)	0.61	0	25.00	366	377
LRR_6	Leucine Rich repeat	0.014	5	23.40	376	391
LRR_4	Leucine Rich repeats (2 copies)	3.5E-08	23	27.00	377	417
LRR_8	Leucine rich repeat	7.3E-09	25	27.00	378	437
LRR_1	Leucine Rich Repeat	0.051	4	20.60	378	400
LRR_1	Leucine Rich Repeat	0.0011	9	20.60	402	424
LRR_6	Leucine Rich repeat	0.11	2	23.40	402	415
DUF5837	Family of unknown function (DUF5837)	0.0026	7	25.00	414	443
LRR_4	Leucine Rich repeats (2 copies)	3.5E-05	14	27.00	426	462
LRR_8	Leucine rich repeat	2E-09	27	27.00	450	509
LRR_1	Leucine Rich Repeat	0.02	5	20.60	451	472
LRR_6	Leucine Rich repeat	0.71	0	23.40	471	487
LRR_4	Leucine Rich repeats (2 copies)	0.00071	10	27.00	478	513
LRR_6	Leucine Rich repeat	0.22	1	23.40	497	508
LRR_8	Leucine rich repeat	8.2E-06	15	27.00	520	556
LRR_6	Leucine Rich repeat	0.021	5	23.40	522	535
LRR_1	Leucine Rich Repeat	0.046	4	20.60	525	544
LRR_4	Leucine Rich repeats (2 copies)	0.0045	7	27.00	526	564
LRR_8	Leucine rich repeat	8.9E-07	18	27.00	565	603
LRR_4	Leucine Rich repeats (2 copies)	1.6E-06	18	27.00	568	603
LRR_6	Leucine Rich repeat	0.021	5	23.40	569	582
LRR_1	Leucine Rich Repeat	0.0085	7	20.60	570	587
LRR_6	Leucine Rich repeat	0.11	2	23.40	593	606
Pkinase	Protein kinase domain	3.2E-38	121	20.40	721	942
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	3E-37	118	23.10	722	941