c2pfam

AT3G47160.1 :

Domain Description Evalue Bits GA Start End
Peptidase_S76 Serine peptidase of plant viral polyprotein, P1 6.6E-05 13 27.00 79 141
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.8E-11 33 27.00 144 190
zf-rbx1 RING-H2 zinc finger domain 0.00014 12 31.00 145 185
zf-RING_2 Ring finger domain 2.2E-10 31 27.30 146 185
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 6.5E-09 26 27.00 146 184
zf-RING_5 zinc-RING finger domain 1.4E-07 21 27.90 146 185
zf-RING_UBOX RING-type zinc-finger 4.3E-06 17 25.20 147 182
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.0012 9 30.00 147 184
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 5.4E-08 23 21.00 147 184
Prok-RING_4 Prokaryotic RING finger family 4 4.5E-09 26 27.00 147 189
zf-RING_10 zinc RING finger of MSL2 5.5E-05 13 31.00 149 199
IBR IBR domain 3.5E-05 14 23.60 155 181
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.003 8 21.40 155 189
zf-RING_4 RING/Ubox like zinc-binding domain 0.00014 12 27.00 161 186
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.43 1 30.00 181 189

245

Peptidase_S76
zf-C3HC4_3
zf-rbx1
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
zf-RING_10
IBR
zf-ANAPC11
zf-RING_4
zf-C3HC4_4

References:

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

IBR
10366851 A novel transactivation domain in parkin. Trends Biochem Sci 1999;24:229-231.
10422847 TRIADs: a new class of proteins with a novel cysteine-rich signature. Protein Sci 1999;8:1557-1561.
15152079 Parkin and relatives: the RBR family of ubiquitin ligases. Physiol Genomics 2004;17:253-263.
12446796 Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily. Mol Biol Evol 2002;19:2039-2050.

zf-ANAPC11

zf-C3HC4_2

zf-RING_UBOX

zf-RING_5

zf-RING_4

zf-RING_2

zf-rbx1

zf-RING_10

zf-C3HC4_3

Prok-RING_4

Peptidase_S76

zf-C3HC4_4

Domain	Description	Evalue	Bits	GA	Start	End
Peptidase_S76	Serine peptidase of plant viral polyprotein, P1	6.6E-05	13	27.00	79	141
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	2.8E-11	33	27.00	144	190
zf-rbx1	RING-H2 zinc finger domain	0.00014	12	31.00	145	185
zf-RING_2	Ring finger domain	2.2E-10	31	27.30	146	185
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	6.5E-09	26	27.00	146	184
zf-RING_5	zinc-RING finger domain	1.4E-07	21	27.90	146	185
zf-RING_UBOX	RING-type zinc-finger	4.3E-06	17	25.20	147	182
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.0012	9	30.00	147	184
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	5.4E-08	23	21.00	147	184
Prok-RING_4	Prokaryotic RING finger family 4	4.5E-09	26	27.00	147	189
zf-RING_10	zinc RING finger of MSL2	5.5E-05	13	31.00	149	199
IBR	IBR domain	3.5E-05	14	23.60	155	181
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.003	8	21.40	155	189
zf-RING_4	RING/Ubox like zinc-binding domain	0.00014	12	27.00	161	186
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.43	1	30.00	181	189